Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3713 |
Symbol | |
ID | 8727466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4473740 |
End bp | 4475881 |
Gene Length | 2142 bp |
Protein Length | 713 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003388514 |
Protein GI | 284038584 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000481 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGGCG ACCAGCAGCC CCCTGACTCA ACGACTACGC TTACTCAACG ACTTGACATT GCTTTTGCCC TGAAAGCGGC CGACCTTGGC GTCTGGGAAA TGGATCCGGT CACCAAACTC GTGAATTGGG ATGATCGATG TCGAGCGTTG TTTGGACTCG CCAAAGACAA TCAGCTGCCT TACCAACAGG CCATCTTATC GATTCACCCT GACGATGTCG CGCGCGTCGA TCAGGCCGTT CAACGCGTCC TGGCGCCTGA TTCGGGTGGC CAGTATGACG TGACCTACCG GACCATTGGG GCTGACGATG GACAGCTACG GTGGGTACGT TTTATCGGCA AGGCCGAGTT CACCCAATCC GGCGAACCTG TCCGCTTCGC GGGAGTAGCT CAGGAGGTAT CTCCGCAAGT GCTGTCCCAG CAGAAAATCG AGGAGGTAGA GAACCGTTTA CAGACCATTA TTACCAATTT GCCCTCGGCT ACGGTCGTCT TTCGAGGTCG CGCATTAGTC GTCGAGACAC CTAGCCAATA TTTCATTGAT ATCATTGGTC GGGGACCCCA TGTGACGGGT AAACCGTTGG GCGAATTAAT GCCCGAACTG GAAAGCCAGT CGTTTCTGGC GATTCTGGAT GAAGTCTACA CATCGGGACA ACCGTTTCGA GCCTTTGGCA CACCGGTTGA GATTCATCTG GACAATGGCT CCACGACGCG CGATTACTTT GACCTAATCT ACACGCCCCT CTTCGATGCG CAAGGGCAGA CCTATGCCAT TCTAAGCGTA GCGACCAATG TTACGGATGT CATCAAGGCC CAGCAACAGG TGGAGCAAAG TGAAGCGAGG TATCGGCTTT TATCGGCTCA GTTAGAAGAG CAGGTCCAGC AGCAGGTAAT GATTCGCCAG CAACTGGAGG AAAGTCAACT CATCTTACAC TCCATGATTG ATCTGGCCGA GCTGGGTACC TATACCATTG ACCTGGCAAC GAATCAGTTG ATAAAATCAC CCCGGGTTGC CGCCTGGTAT GGACTCCCTG AAATCACCGA TGTGGCGACA TCGCTGGGTG TGATTCAGGC TAATGATCAA GAGCGGGTGA ATCAGGCCTA TACGTCGGCT CTTCAAGTGG GTTCTACAGG CTCTTACCAG GTTGAATACA CCGTCATTAA TCCGTTGACC AGGCAAACCT ACATCCTGCA AACGGTTGGG CAGTCTCGGC GGAATGGGAG TGGTCAATTT ACCTACGTGG ATGGTCTGGT CAGAGATGTG ACGAGTCAAC GGCAGGCCCA ATTGGCCCTG GAGCAGCAGG TCCAGGCGCG CACCAAAGAA CTGGCCGCCA TCAACGGGGA ATTGCTGTCT ATCAACGAGA GCTTTGTCAG GGCTAACCTA GCCCTGGAAA CGGCCAACCA TGACCTGTTA CGTTCCAATC AGAACCTGGA GCAGTTCGCC TACATTGCTT CTCATGACTT GCAGGAGCCC CTGCGCAAGA TCCAGCAGTT CGGTGATCTG CTCCAGAGTC AATATGGAGG CCAGCTTGGG GATGGAGCCG CTCATTTAGA GCGGATGCAG ACCGCCGCCA GTCGCATGTC GGTGTTAATT CGCGACTTGT TAGCCTTCTC CCGGATTTCC ACCACCCAGG TGATTGCCCA ACCCGTGGCC CTGGATCAGG TGGTTAGTCA GGTGTTAGAT ACCTTGTCTA TAGTGGTTGA GGAAAGTGGC GCGCAGGTGG TTGTGACTAG CTTGCCGGTA GTGCCGGGGG ATCGCTCTCA ATTGGACCAA CTGTTTCAGA ACCTGTTGTC CAACGCGGTC AAGTTTCGGC GTGCCAGCCC AGGCGGGGTG CTGGTTCCCC CTCAAATCCG GGTTAAGGCC AGTCTGGTAG CCGAAAGCCA ACTACCCCCT TCGGTACACC CTTCTCGGTA TGCCCAAACG TATCACTGCA TCGAGGTAGC CGACAACGGC ATTGGTTTTG AGGAGAAGTA TGTGGGCCGC ATGTTTCAGG TGTTTCAGCG GTTGCACGGC CGGAACGAGT TTGCCGGTAC GGGCATCGGG TTGGCCATTG TGCAGAAGGT GGTGACCAAT CATGGGGGAG CCATCACCGC GACGAGTGAG CCCGGCCAGG GAGCTACCTT TTGGGTGTAC TTGCCGGCCT AA
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Protein sequence | MTGDQQPPDS TTTLTQRLDI AFALKAADLG VWEMDPVTKL VNWDDRCRAL FGLAKDNQLP YQQAILSIHP DDVARVDQAV QRVLAPDSGG QYDVTYRTIG ADDGQLRWVR FIGKAEFTQS GEPVRFAGVA QEVSPQVLSQ QKIEEVENRL QTIITNLPSA TVVFRGRALV VETPSQYFID IIGRGPHVTG KPLGELMPEL ESQSFLAILD EVYTSGQPFR AFGTPVEIHL DNGSTTRDYF DLIYTPLFDA QGQTYAILSV ATNVTDVIKA QQQVEQSEAR YRLLSAQLEE QVQQQVMIRQ QLEESQLILH SMIDLAELGT YTIDLATNQL IKSPRVAAWY GLPEITDVAT SLGVIQANDQ ERVNQAYTSA LQVGSTGSYQ VEYTVINPLT RQTYILQTVG QSRRNGSGQF TYVDGLVRDV TSQRQAQLAL EQQVQARTKE LAAINGELLS INESFVRANL ALETANHDLL RSNQNLEQFA YIASHDLQEP LRKIQQFGDL LQSQYGGQLG DGAAHLERMQ TAASRMSVLI RDLLAFSRIS TTQVIAQPVA LDQVVSQVLD TLSIVVEESG AQVVVTSLPV VPGDRSQLDQ LFQNLLSNAV KFRRASPGGV LVPPQIRVKA SLVAESQLPP SVHPSRYAQT YHCIEVADNG IGFEEKYVGR MFQVFQRLHG RNEFAGTGIG LAIVQKVVTN HGGAITATSE PGQGATFWVY LPA
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