Gene Slin_3707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3707 
Symbol 
ID8727460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4468073 
End bp4468636 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content40% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388508 
Protein GI284038578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000079731 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000219124 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCACGG TGTTCAGATA TGATACCAGC GTTTATAAAT TCCGTGACTG GGCCGAATTG 
GTTCTGGGGC ACCAAAATCT AGAGCGCATT AATGAAAAGA CACTTCAAAA TGCAAAAGCT
CCTAAAAACC GGGTATACCA GTTTATTACC TTAATGAAGA ACGCATTTGA AGCGGATAAT
GATATAAGAG AATTGTTCGG GCAATTTGTT AAAAATGAAG TAGCGATCCG CATTGATTTT
GAACCTTGGC TATCTATTTA TCCAAATTTC AGGGTACACG AAGCAGACCA AGAAGCTACA
TCGCCTTTCC ATAGGGACCG TGATTACCTG AAAGAGCGGG GTTCATTGAA AGTGTGGCTC
CCCTTTACAC ATGTATCAAA AGGAGGAACC TTATGGGTGG AAAGTGAAGA AGGCAAAAAA
GATTATCGCC CGTATGAAAT GAAATATGGA GAAGCACTTC TTTTTGATAG TTTAAATCTT
GAGCATGGAT GTTTCTTTAA CGATTCTGGC TCCTGTAGGG TAAGCATGGA TTTTATCATT
CGAAAGAATC CGATGTTGGT ATAG
 
Protein sequence
MITVFRYDTS VYKFRDWAEL VLGHQNLERI NEKTLQNAKA PKNRVYQFIT LMKNAFEADN 
DIRELFGQFV KNEVAIRIDF EPWLSIYPNF RVHEADQEAT SPFHRDRDYL KERGSLKVWL
PFTHVSKGGT LWVESEEGKK DYRPYEMKYG EALLFDSLNL EHGCFFNDSG SCRVSMDFII
RKNPMLV