Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3697 |
Symbol | |
ID | 8727450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4456342 |
End bp | 4457004 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003388498 |
Protein GI | 284038568 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000154802 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0000196583 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTAGGAA GATATGTAGT ATCAGCAGCT AGATTAGTAG CAGCAAGACC AGCAGCAGCG GCAAGACCAG CAGCAGCGGC AAGACCAGCA GCAGCGGCAA GACCAGCAGT AGCGGCAAGA CCAGCAGTAG CAACTGCAAG GCCAGGAGTT GTAAGAGTAC CCAGAAGACC TTTTAGTACA TTCAAAGTTG TAGGTCTGGC TGCCACTGTA GCAGTGGCTG GTGTAATACT TGACCGACCG GGATATCACT ACTATAAAGT TAAGACACTT ATCTGCTCTA TAGATCCTGA TGACAACCCT GAACACTTAG TGGAGTTGGT TTATCAGGAG TTAATTAGGT ATGCGGCCCC TGGTGGTAAA GGTATAAGAT CGACTGAGAA AGGAACACGT GTAAAGGTTA CCTTTTTAGG AGACGTAATA TCAACAGCTA ATCCAATAGA CAAGTCTATA ACTAATCAAA CGCAGGAAAA TCACTTGCTA CATAATGGGA AGGTTACACG TAAAGTGGTG CTTGAAGGTA ATAGAATATA TATTGAAACT ATTGGGGAGG GGAATGGGGC TTTTCCTAGG ATTAATAAGA TTCTTGCTAA ACCACTTTGG GATTACATAG CTAGTGATAT TAAGGAAAAT TTGAACAAAA AGGGGTATAA TTTAAACAAA TAG
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Protein sequence | MLGRYVVSAA RLVAARPAAA ARPAAAARPA AAARPAVAAR PAVATARPGV VRVPRRPFST FKVVGLAATV AVAGVILDRP GYHYYKVKTL ICSIDPDDNP EHLVELVYQE LIRYAAPGGK GIRSTEKGTR VKVTFLGDVI STANPIDKSI TNQTQENHLL HNGKVTRKVV LEGNRIYIET IGEGNGAFPR INKILAKPLW DYIASDIKEN LNKKGYNLNK
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