Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3686 |
Symbol | |
ID | 8727439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4443993 |
End bp | 4444883 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | Integrase catalytic region |
Protein accession | YP_003388490 |
Protein GI | 284038560 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.181009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0371116 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTATG ACTTTATCCG TTCGCTGGCA GGCGAGTTTA ATATCGAAAT GCTTTGCGCG GCATTAGAGG TAAGTCGCAC GGCTTACTAT CGCTATAGGC GGGGAGCCAG TTACCAGCAA ACGACCCACC AACAGGCTAA AAAGCAGTTG GTAGAACAAG TGTTTTGGGC GCACAAACGA CGCTATGGGA GTCGCCGAAT CGTAGCCGAG TTACGAGAGC AAGGTTATCA GATAGTTCGT CAACGGGTAC GATCGTTGAT GAAAATAGCT GATTTACAGC CTATTCAACC CAAGTCATTT GTGCCACGCA CAACTGATAG TACCCATGGG AAAGGATACT GGCCTAATCT ATTACTGGAT CAATCTGTGC CGACAGCCCC GAATTTGGTT TGGGTTAGCG ACATAACGTA CCTGCCGCTG GTCAATGGCG AATGGGCCTA CTTAGGGGGT TGGCTGGACT TATTCTCTCG TCGAATCGTG GGGTGGCGAG TGGACGATAA CATGGAAGAT GCATTGGTAA CCAGTCCGTT GCGAATGGCC TTGCAATCGC GTCAGCCTGC TCATGGCCTC ATTACTCATT CGGATCGGGG TGGTCAATAC GTCTCTAATG ATTTGCAAGA GTTGATCAGT TTATGGCGTA TCAGGCCCAG CATGAGCCGG GCCGACGATC CTTATGACAA CGCATTTGCG GAGTCATTCT GGAGCCGCTT AAAAGCGGAG TTATTGGAGG GTGGCGTCTT TATGAGCGTA GACGATGCCC GAACGGAGAT TTTCGAGTAC ATTGAGACGT ACTACAATCG GGTGCGGAAA CATTCGTCAC TTGGCTATAA AAGCCCAGAG CAGTTCGAGA AAGAGTATTA TACAAAACAT GCAAGTTCTG TGTGCCGCTA A
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Protein sequence | MRYDFIRSLA GEFNIEMLCA ALEVSRTAYY RYRRGASYQQ TTHQQAKKQL VEQVFWAHKR RYGSRRIVAE LREQGYQIVR QRVRSLMKIA DLQPIQPKSF VPRTTDSTHG KGYWPNLLLD QSVPTAPNLV WVSDITYLPL VNGEWAYLGG WLDLFSRRIV GWRVDDNMED ALVTSPLRMA LQSRQPAHGL ITHSDRGGQY VSNDLQELIS LWRIRPSMSR ADDPYDNAFA ESFWSRLKAE LLEGGVFMSV DDARTEIFEY IETYYNRVRK HSSLGYKSPE QFEKEYYTKH ASSVCR
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