| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3678 |
|---|
| Symbol | |
|---|
| ID | 8727431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 4438401 |
|---|
| End bp | 4439126 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003388483 |
|---|
| Protein GI | 284038553 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.200672 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.523007 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA CAGGAAACAC CGTGTTTATC AGCGGAGGAA GTGCGGGGAT CGGGCTAGCC
ATTGCCCAAA AACTGAGCGC CGAAGGCAAT CGAATCATCA TTAATGGCCG TAACCCCGAC
AGGTTGCAAA AAGCCTTATC TGAACTTAAG GATGCAGTAG CCATTCAGGG AGATCTTTCA
CTGGAAACGG ATCGGGTTCG TATCGCTCGT GAACTGGCCG AACAGTACCC GGACGTCAAT
ATCATTGTCA ACAATGCGGG GGCTGCGTTC ATGAATAATC TGAGCGACAG CGCCAATAAC
GCGGCCGAAA AGGCGTATCA GGAGATCAAT ACCAACTATC TGAGCATTAT CCATTTTACG
TCGCTGGTGC TGCCCCTGTT ACTGAAGCAG GACGATGCGG CCATCGTAAA CGTAACCTCC
ATCGCGGTTT TTAGGGGAAA CAAATTTCTG CCAACCTATG CCGCCAGCAA GGCCGCCCTG
CACAGCTACA CACAGGGCCT GAGAGACACG TTTGCCGATA ATAATAAGCT GAACATCTAT
GAAGTGTACC CGCCCCTGGT CAATACGGAG TTTTCGGCAG AAATAGGAGG TGCCAATGGC
ATTCCGGCGT CGGAAGTAGC CGACGAGCTT TTCCTGGCCT TGGCCCAAAA CCAGTTTGAA
GTACCGGTTG GTGAAACAAA GCACATTCAT CAATTAACAG CGCAAATTTC AGCCAATACG
CACTGA
|
|---|
| Protein sequence | MKTTGNTVFI SGGSAGIGLA IAQKLSAEGN RIIINGRNPD RLQKALSELK DAVAIQGDLS
LETDRVRIAR ELAEQYPDVN IIVNNAGAAF MNNLSDSANN AAEKAYQEIN TNYLSIIHFT
SLVLPLLLKQ DDAAIVNVTS IAVFRGNKFL PTYAASKAAL HSYTQGLRDT FADNNKLNIY
EVYPPLVNTE FSAEIGGANG IPASEVADEL FLALAQNQFE VPVGETKHIH QLTAQISANT
H
|
|---|
| |