Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3666 |
Symbol | |
ID | 8727419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4423754 |
End bp | 4424608 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | cyclase/dehydrase |
Protein accession | YP_003388471 |
Protein GI | 284038541 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.470859 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAACA AAAAGCAGCC CGTGTCGAGT GTACTGGGCA TGGGACAGGT CAAACCGGAC GCCAGTGGTT CCAGCCAAAT CAACGTGGGC AATACGGAGC GAATCTGGTC GGCGGCTGGC GGAGCGTTGT TAGCCACGTA CGGCTTACGG CGGGGTTCGT TTAGTGGGCT AGTACTGGCC ACGCTGGGTG GCTATATGGT CTACCGGGGG GCGTCGGGCT ATTGCCCCAT GAATCAGGCG CTGGGGCGGA ATACGGCCGA GCCAAACGCC GAAAATCAGG TGGTCGATTC AATTGAAATC GCCAAAAGCC TGACGATCAA CAAACCGCGC CAGGAGGTAT ATGCCTACTG GCGGCAACTG GAGAATCTGC CCCGGTTTAT GTTTCACCTG AGCGAGGTCC GACAACTCGA CAACAAACGG TCGCATTGGG TAGCGAAACT CTCGGATAAT TTCCTTGCCA AAACGCTGGG AACGGTGGAG TGGGATGCCC AGATTCTGGA GGAGGTAGAA AATGAGCGAT TGGTCTGGAA ATCCCTCGCC GACGCCCGGA TTGACAACGC AGGTGAAGTC CGTTTTGTCG ATGCGCCCAA TGGGCAGGGT ACGGAAGTTC ACGCCGTGAT CAAGTACCGT CCACCAGTTG GGCAACTGGG TGGTACGATC ATGAAACTGT TTAACCCGGC TTTTGAGGAA ATGATCAAGC AGGACCTGCG CCGGTTCAAG CAATTGCTGG AAACCGGCGA AATCACGACC ATCGAGGGGC AGCCATCGGG TCGGAAACCT GAGCAACAAT CCGGTAAAAA ACCGGTATCT GAACACGCTA AAGCAGACGA AAAACATGAA AGCGCTATGT TATAA
|
Protein sequence | MANKKQPVSS VLGMGQVKPD ASGSSQINVG NTERIWSAAG GALLATYGLR RGSFSGLVLA TLGGYMVYRG ASGYCPMNQA LGRNTAEPNA ENQVVDSIEI AKSLTINKPR QEVYAYWRQL ENLPRFMFHL SEVRQLDNKR SHWVAKLSDN FLAKTLGTVE WDAQILEEVE NERLVWKSLA DARIDNAGEV RFVDAPNGQG TEVHAVIKYR PPVGQLGGTI MKLFNPAFEE MIKQDLRRFK QLLETGEITT IEGQPSGRKP EQQSGKKPVS EHAKADEKHE SAML
|
| |