Gene Slin_3636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3636 
Symbol 
ID8727389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4393695 
End bp4394930 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content55% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003388442 
Protein GI284038512 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.138317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.90769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACAC TTTCTCCCAA CTCATCCTCC CTGCGCCCTT TGTTTGCCCT ACCGGTTATT 
GTGGCTGCAC TGGGCTATTT CGTGGATGTA TACGACCTGC TGTTGTTCAA CATTGTGCGG
GTACCCAGCC TGAAAGAATT GGGGCTTTCT GAGGCAGACA TCTCACTCAT TGGCGGTAAA
ATCCTGAATT ATCAGCAGGC CGGTTTGCTT CTCGGCGGAA TTCTATGGGG GATTTTGGGC
GACAAACGGG GCCGACTTTC GGTTTTGTTT GGGAGCATCA TTACGTATTC GCTGGCGAAT
CTGGCCTGCG GGTTTGTTCA TGACCCACAG TTGTACGCGT GGCTTCGGTT TATTGCCGGT
CTCGGGCTGG CCGGTGAACT GGGGGCGGGT ATTACGCTGG TGAGCGAGAT TTTACCCCCT
AACCTGCGCG GATATGGCTC CTCGCTGGTG GCGAGCGTGG GGTTACTGGG TGCCGTTGTC
GCGTACTTTA CCGTCACGCT TTTTGACTGG CGCACGACGT ATTTTATTGG CGGTGGGCTG
GGCCTGGGGC TGCTGGTGCT CCGGGTTAGT GTACTCGAAT CGGGCATGTT CAAACGCGTG
CAGGGTACGA GCGTGAGCCG GGGGAACTTT CTGGCGTTGT TCAACAGAAA ATCGAAGGTG
TTGAGGTATC TCCGGTGTAT GGGCATTGCT CTCCCGACTT ATCTGGTCAT TGGTATCCTG
GCCACGTTTG GAAATGAGTT CGGGAAAGCG ATTGGCCTCG CGGAGCCTGT TCAGCCCGGC
CGATGCGTGA TGTTTACCTA CGTGGGTACC GTTCTGGGCG ATTTGGCGAG TGGTATTCTC
AGCCAGTATC TTCAATCCCG GCGCAAAGCC GTTGGTCTGA TGATGAGCCT GACGTTCGTT
TTCGTCATCA TATATCTCTT TGGTGGTATC AACTCGACCG GGGCTTTTTA TGGCCTTTGC
CTGGCTATGG GCTTCGGTAT CGGCTACATC GCCATGTTCC TGACTATTAC GGCGGAGAGT
TTCGGTACCA ACCTGCGGGC TACGGCCACC ACATCGGTAG CCAATAACGT TCGGGCCACA
ACGCTGATCA GCATTCCCGC CTTTCAGGCC ATGAAACCTT CGCTGGGAGT TTTGGAAGCT
GCGGCCATTG TCGCTTTTGT TTGCTTCGCC CTCGGCTACT GGTCGCTGGC AACGATGGAA
GAAACGTATG GCAAGGAGCT GGATTACACG GAGTAG
 
Protein sequence
MQTLSPNSSS LRPLFALPVI VAALGYFVDV YDLLLFNIVR VPSLKELGLS EADISLIGGK 
ILNYQQAGLL LGGILWGILG DKRGRLSVLF GSIITYSLAN LACGFVHDPQ LYAWLRFIAG
LGLAGELGAG ITLVSEILPP NLRGYGSSLV ASVGLLGAVV AYFTVTLFDW RTTYFIGGGL
GLGLLVLRVS VLESGMFKRV QGTSVSRGNF LALFNRKSKV LRYLRCMGIA LPTYLVIGIL
ATFGNEFGKA IGLAEPVQPG RCVMFTYVGT VLGDLASGIL SQYLQSRRKA VGLMMSLTFV
FVIIYLFGGI NSTGAFYGLC LAMGFGIGYI AMFLTITAES FGTNLRATAT TSVANNVRAT
TLISIPAFQA MKPSLGVLEA AAIVAFVCFA LGYWSLATME ETYGKELDYT E