| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3625 |
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| Symbol | |
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| ID | 8727378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 4381631 |
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| End bp | 4383346 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003388431 |
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| Protein GI | 284038501 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTACA AAGATGCAGT CATTTATCAA ATCTACCCGC GTTCCTTTGC CGATAGTAAC
GGCGATGGCA TTGGGGATTT GCCCGGAATA GCCAGTAAGC TGGATTATCT GGCTGAATTA
GGCGTCGATA TTTTATGGTT GAGTCCCATT TTCGATTCAC CCAACGCCGA CAATGGCTAC
GATGTTTCCG ACTATGAAGC CATCATGCCC GAGTTTGGTA CCATGGCCGA TTTTGATAAC
CTGCTGGCAG GTGTGCATCA GCGCGGTATG CGGCTCATCC TGGATCTGGT TGTCAACCAT
AGCTCCGACG AGCACCGCTG GTTTCAGGAA AGCCGCAAAA GCAAAGACAA TCCATACCGG
GACTACTACA TCTGGCGCAC CCCCAAACTC ACGGCCGACG GTCCCGCTGA ACCCAACAAC
TGGCAGTCGA TCTTTTCAGG ACCGGCCTGG GCGTTCGATG AAACCACGGG CGAGTATTAT
CTTCATTTGT TCGCAACTAA ACAACCCGAC CTCAACTGGG AGCACCCGCC CCTGCGCGAA
GCCATTTACA AAATGATGCG TTTCTGGCTC GACAAAGGCG TCGATGGGTT CCGGATGGAC
GTTATTCCGT TTTTGTCGAA AGACCAGACA TTCCCGGATT ACCCGGCGGG TCGTTACGGC
GATTCGAGCG TTCATGCCAA TGGACCGCGC ATTCATGAGT TTTTGCAGGA AATGAATCAT
GAGGTCCTCA GCCGGTACGG GCGCGCTGGT GAAGGCTGCG TCAGCATTGG CGAGGGTATT
GGCGTTACGG CCGAACTGGC AAACCTGTAT GTGGGTAAAG ACCGGCATGA ACTGAACATG
ATCTATCATT TCGACCATGC CGTACCCCGT GAAGAATACC GGTTCGTTGA CCCGGCCCCC
GAGTTCACCG TACTTGAGTT GAAAGCCATC TTTGCCAAAT GGAATCTCGC TCTCGACAGC
ATCGACCCCG CAACCCAGGC CACGGGCGGC TGGCAAAATA TTTACTTTGG GAATCACGAT
AATCCCCGAT GCATCTCCCG CTTTGGTGAT CCGGAACGCT ACCCGTACGA ATCAGCAACC
ATGCTGGCAA CGGTTCTGCT TACCCAACGG GGTACACCCA ATATTTATCA GGGCGACGAA
ATTGGTATGA CCAACTGCGC GTTCGACACC ATTGACGAGT ACAACGACAT TCAGGTAAAA
AATGCCTGGC AGGCGTTGAT CACCCAGGGG GAGCATTCGC CCGAGGTGTT TCTGGCAACG
GCCAACCAGA TCGCCCGCGA CCACGCTCGT ACACCTATGC AATGGAGCGA TGCCCCGAAT
GCAGGGTTCA CGACGGGGCA GCCGTGGCTT AAAATAAACC ATAACTATCA AACAATTAAT
GTAAGCCAGC AGGAAGCGAC TCCCCGTTCG GTACTGCATT ATTACCAGAA ACTACTTCGC
TGGCGAAAGC AGACACTGGC TATTCATGAG GGAACGTATA GCGATTTGCT ACCCGATCAC
CCATCTCTTT GGGTATTTGA ACGTACGCTA AACAATGTTA CTTTTTACAC AGTTGCTAAC
TTCTCGGGAG ACTTTGTAGT GATACCGGTC ATACAGGGCG TTTCGCTTTC AGATAACCAG
CTGGTTTTAG CCAATCTGCC GAACCAAACC GATACGTTAC AACCGTTCGA AGCCCGTATT
TATGAACGAA AAAAGACTGG TATAAGCGAT GAATAA
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| Protein sequence | MNYKDAVIYQ IYPRSFADSN GDGIGDLPGI ASKLDYLAEL GVDILWLSPI FDSPNADNGY
DVSDYEAIMP EFGTMADFDN LLAGVHQRGM RLILDLVVNH SSDEHRWFQE SRKSKDNPYR
DYYIWRTPKL TADGPAEPNN WQSIFSGPAW AFDETTGEYY LHLFATKQPD LNWEHPPLRE
AIYKMMRFWL DKGVDGFRMD VIPFLSKDQT FPDYPAGRYG DSSVHANGPR IHEFLQEMNH
EVLSRYGRAG EGCVSIGEGI GVTAELANLY VGKDRHELNM IYHFDHAVPR EEYRFVDPAP
EFTVLELKAI FAKWNLALDS IDPATQATGG WQNIYFGNHD NPRCISRFGD PERYPYESAT
MLATVLLTQR GTPNIYQGDE IGMTNCAFDT IDEYNDIQVK NAWQALITQG EHSPEVFLAT
ANQIARDHAR TPMQWSDAPN AGFTTGQPWL KINHNYQTIN VSQQEATPRS VLHYYQKLLR
WRKQTLAIHE GTYSDLLPDH PSLWVFERTL NNVTFYTVAN FSGDFVVIPV IQGVSLSDNQ
LVLANLPNQT DTLQPFEARI YERKKTGISD E
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