| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3619 |
|---|
| Symbol | |
|---|
| ID | 8727372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 4374778 |
|---|
| End bp | 4376076 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | glutamyl-tRNA reductase |
|---|
| Protein accession | YP_003388425 |
|---|
| Protein GI | 284038495 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.928218 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.597064 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGACA CCTTCAAAAC AATTAGTCTG TCCCACAAAA CGGCACCCCT TCAGGTGCGG
GAGCTAATTG CACTTAACGA AGACGAGGCA AAGCGTTTGA TGCTTCGGCT GCGGGACTTT
TTCGGGTTGA CGGACTTGCT TGTCATTTCT ACCTGCAACC GCACTGAAGT GTACTATGCC
TTTGATCAGG ATCTTAACGC TGATATTGCC CGGTTGCTCC TCATTGAAAA AGGCCTGACC
GATACGGATA ACTACCTGCC TTACTTCCAG TTCTTCAGCA GTCATGACGA AGCGGTTCGG
CATTTGTTTG AAGTATGCGT TGGCCTGCAC TCGCAGGTTG TCGGCGATAT GCAGATTCCA
AATCAGGTGA AGCAGTCGTA CCAATGGTCG GCCGATCTGG ATATGGCTGG TCCGTTTTTG
CACCGGCTGA TGCACACGAT CTTCTTCACC AACAAACGCG TAGCTCAGGA AACGCCATTC
CGCGATGGAG CCGCTTCGGT TTCGTATGCC GCAGTGGAAT TGATCGATGA GCTGATTGGC
GAGAACCAGA ACCCGAATAT ACTGGTCATT GGTCTGGGAG AGATCGGTAC AGACGTTTGT
AAGAATCTCG AAGCCCGGTC TGGAGGAACA CGAAACCAGA CAAACATTAC GCTCTGCAAC
CGCACCCAGG CGAAAGCCGA AGCACTGGCC AGCCAGTACG GGTTCCGGGT GGCTGATTTT
GCTGACTTAA CCGACGAAAT TCGTCGTGCT CATGTCATCA TTTCATCCGT ACAACGCGAC
GAGCCGCTCA TTACGCCTGC ACTTCTTCAG GATATGAACG TGCTGACGTT TAAATACTTT
ATCGACTTAT CGGTTCCCCG CAGTGTTGAT GCCGCCGTTG AGCAGATTCC GGGTATGCTG
GTCTACAACA TCGACCACAT CCGCAACCGT GCCGACGAAG CCCTTAATCA ACGCCTGGCC
GCTATTCCGA AAGTCGAAGC GATTATCACC CAGGCCGTAG CCGAGTTTGG CGACTGGTCG
AAGGAGATGG TTGTATCGCC AACGATTAAC AAGCTTAAAA ATGCCCTGGA GCAGATTCGT
CGCGATGAGA TTGCCCGGCA TTTGAAACAC CTTACCCCCG ATGAGTCGGA GAAGGTTGAC
AAGATTACAA AGGGTATCAT GCAGAAGATC ATCAAGCTGC CCGTTCTTCA GCTGAAAGCC
GCCTGCAAGC GGGGTGAAGC CGAAACCCTG ATCGACGTGC TGAATGATTT ATTCGATCTG
GAAAAACACT CTGTCGAAGA CCCAAAACAT TTATATTAA
|
|---|
| Protein sequence | MLDTFKTISL SHKTAPLQVR ELIALNEDEA KRLMLRLRDF FGLTDLLVIS TCNRTEVYYA
FDQDLNADIA RLLLIEKGLT DTDNYLPYFQ FFSSHDEAVR HLFEVCVGLH SQVVGDMQIP
NQVKQSYQWS ADLDMAGPFL HRLMHTIFFT NKRVAQETPF RDGAASVSYA AVELIDELIG
ENQNPNILVI GLGEIGTDVC KNLEARSGGT RNQTNITLCN RTQAKAEALA SQYGFRVADF
ADLTDEIRRA HVIISSVQRD EPLITPALLQ DMNVLTFKYF IDLSVPRSVD AAVEQIPGML
VYNIDHIRNR ADEALNQRLA AIPKVEAIIT QAVAEFGDWS KEMVVSPTIN KLKNALEQIR
RDEIARHLKH LTPDESEKVD KITKGIMQKI IKLPVLQLKA ACKRGEAETL IDVLNDLFDL
EKHSVEDPKH LY
|
|---|
| |