Gene Slin_3618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3618 
Symbol 
ID8727371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4373249 
End bp4374442 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content46% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003388424 
Protein GI284038494 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.261667 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAGT CATTTGATAT TTACAATCAG AACAACGTTC TGAAGATTAT AGTAGCTCTT 
AATCTACTCC TGGTAGGAAC GGGGTCGCTT CTTTATACAA ACCGGCTCAT CAATAAGCTG
GAAGATCGGG AGAAGCAATA TGTTCAGCTA TATTCTAAAA GTATTGCTTA TCTGTTTGAT
ACAAGCCACG CTGATGCTGG TGATTTAACG TTTGTAACGA GCGAAATCCT TGAAGCAAAC
AGCTCGATTC CCGCTATATA TGTCAACCCC GATAACCAGA TCGCAATGAA GCGGAACATT
GATGTTCCGG ACGATTACAC GCCAGAAGAA ACGGAGCGCT TTTTACGCCA GAAAATTGCT
GATATGCGTA AGAACCATAT GCCCTTACCG GTTGAAATAG GGAATGGGGA GCGTGGGCTG
GTGTATTACA ATAACTCGAA TCTACTCAGA CAACTAAACT ACTTCCCTTA CGCGCTTCTG
ACGATTCTGG CGGCTTTGAG TGTATTAGCT TACCTAGCAT TCAGTTCATC ACGACGAGCC
GAGCAAAATA GGGTCTGGGT TGGGTTAGCC AAAGAGACAG CTCACCAGCT GGGTACGCCC
ATGTCGTCGC TGATGGCGTG GGTGGAGTAC ATGCGCTCTG ACCCCGACCA GTTTGACGGG
TCGATTACCG ACGAAATTGA GAAGGATGTA CAGCGGCTGG AAACGATTAC GGCCCGTTTC
TCCAGCATCG GTTCTATACC AACCCTGAAA GAGGAAAACG TAAATGATGT GGTGAGGCAG
TTTACGGATT ACCTGGCCAG ACGTATTTCG ACAAAAGTGA AAATGAGCGT GACCAGTCAG
TTACCGCCGG GACAATTGAT TAGAATTAAT AAACTGTTGT TCGAGTGGGT CATTGAGAAC
ATCTGTAAAA ATGCGGTCGA TGCCATGAAA GGGGTTGGCG AATTACGGCT GAACATGGTG
CTTTTACCGC ACGATGAAGT GGCCATTGAC ATTACGGACA CGGGCAAAGG CATCTCAAAA
GCCAACATTC AGAAGGTATT CTCGCCTGGA TTCAGTACCA AGAAGCGGGG ATGGGGGTTG
GGACTTACCC TGGCCAAACG CATTGTAGAA GAGTACCATA ATGGGCGACT CTACGTAAAA
AGTTCGGAAG TGGGTAAGGG AACAACCTTC CGAATCGTAT TGAACAGAAA GTAA
 
Protein sequence
MLKSFDIYNQ NNVLKIIVAL NLLLVGTGSL LYTNRLINKL EDREKQYVQL YSKSIAYLFD 
TSHADAGDLT FVTSEILEAN SSIPAIYVNP DNQIAMKRNI DVPDDYTPEE TERFLRQKIA
DMRKNHMPLP VEIGNGERGL VYYNNSNLLR QLNYFPYALL TILAALSVLA YLAFSSSRRA
EQNRVWVGLA KETAHQLGTP MSSLMAWVEY MRSDPDQFDG SITDEIEKDV QRLETITARF
SSIGSIPTLK EENVNDVVRQ FTDYLARRIS TKVKMSVTSQ LPPGQLIRIN KLLFEWVIEN
ICKNAVDAMK GVGELRLNMV LLPHDEVAID ITDTGKGISK ANIQKVFSPG FSTKKRGWGL
GLTLAKRIVE EYHNGRLYVK SSEVGKGTTF RIVLNRK