Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3618 |
Symbol | |
ID | 8727371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4373249 |
End bp | 4374442 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | histidine kinase |
Protein accession | YP_003388424 |
Protein GI | 284038494 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.261667 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAAAGT CATTTGATAT TTACAATCAG AACAACGTTC TGAAGATTAT AGTAGCTCTT AATCTACTCC TGGTAGGAAC GGGGTCGCTT CTTTATACAA ACCGGCTCAT CAATAAGCTG GAAGATCGGG AGAAGCAATA TGTTCAGCTA TATTCTAAAA GTATTGCTTA TCTGTTTGAT ACAAGCCACG CTGATGCTGG TGATTTAACG TTTGTAACGA GCGAAATCCT TGAAGCAAAC AGCTCGATTC CCGCTATATA TGTCAACCCC GATAACCAGA TCGCAATGAA GCGGAACATT GATGTTCCGG ACGATTACAC GCCAGAAGAA ACGGAGCGCT TTTTACGCCA GAAAATTGCT GATATGCGTA AGAACCATAT GCCCTTACCG GTTGAAATAG GGAATGGGGA GCGTGGGCTG GTGTATTACA ATAACTCGAA TCTACTCAGA CAACTAAACT ACTTCCCTTA CGCGCTTCTG ACGATTCTGG CGGCTTTGAG TGTATTAGCT TACCTAGCAT TCAGTTCATC ACGACGAGCC GAGCAAAATA GGGTCTGGGT TGGGTTAGCC AAAGAGACAG CTCACCAGCT GGGTACGCCC ATGTCGTCGC TGATGGCGTG GGTGGAGTAC ATGCGCTCTG ACCCCGACCA GTTTGACGGG TCGATTACCG ACGAAATTGA GAAGGATGTA CAGCGGCTGG AAACGATTAC GGCCCGTTTC TCCAGCATCG GTTCTATACC AACCCTGAAA GAGGAAAACG TAAATGATGT GGTGAGGCAG TTTACGGATT ACCTGGCCAG ACGTATTTCG ACAAAAGTGA AAATGAGCGT GACCAGTCAG TTACCGCCGG GACAATTGAT TAGAATTAAT AAACTGTTGT TCGAGTGGGT CATTGAGAAC ATCTGTAAAA ATGCGGTCGA TGCCATGAAA GGGGTTGGCG AATTACGGCT GAACATGGTG CTTTTACCGC ACGATGAAGT GGCCATTGAC ATTACGGACA CGGGCAAAGG CATCTCAAAA GCCAACATTC AGAAGGTATT CTCGCCTGGA TTCAGTACCA AGAAGCGGGG ATGGGGGTTG GGACTTACCC TGGCCAAACG CATTGTAGAA GAGTACCATA ATGGGCGACT CTACGTAAAA AGTTCGGAAG TGGGTAAGGG AACAACCTTC CGAATCGTAT TGAACAGAAA GTAA
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Protein sequence | MLKSFDIYNQ NNVLKIIVAL NLLLVGTGSL LYTNRLINKL EDREKQYVQL YSKSIAYLFD TSHADAGDLT FVTSEILEAN SSIPAIYVNP DNQIAMKRNI DVPDDYTPEE TERFLRQKIA DMRKNHMPLP VEIGNGERGL VYYNNSNLLR QLNYFPYALL TILAALSVLA YLAFSSSRRA EQNRVWVGLA KETAHQLGTP MSSLMAWVEY MRSDPDQFDG SITDEIEKDV QRLETITARF SSIGSIPTLK EENVNDVVRQ FTDYLARRIS TKVKMSVTSQ LPPGQLIRIN KLLFEWVIEN ICKNAVDAMK GVGELRLNMV LLPHDEVAID ITDTGKGISK ANIQKVFSPG FSTKKRGWGL GLTLAKRIVE EYHNGRLYVK SSEVGKGTTF RIVLNRK
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