Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3606 |
Symbol | |
ID | 8727359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4361548 |
End bp | 4362438 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | Integrase catalytic region |
Protein accession | YP_003388412 |
Protein GI | 284038482 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.607148 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.464703 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGGTAA TTTGTAAGCT GTTTGGCCGA GTGAGACAAG CCTGGTATGC GGCTACCCGG CGACAGGAGA AGGTGGGATT TCAGACGGAT GCTATCTTAC AGGAAGTCAG GCGAATACGC CGTGACATTC CAGGCATGGG CACCCACAAA CTCCATCATG AAATGCAAGT ATTTTTAACC CGGCATCGTA TCAAGCTGGG CCGGGATCGC TTGCATGCGC TGTTGAAAGA GAACGGCATG TTGGCGAAAC GAAAGGCCCA GAAGGTCACG ACAACTCAAT CGAATCATAC GCATTTTAAA TACCCTAACA AGGTCAAAAA TGTGATTCCT TCTCGAGCTA ATGAGCTGTG GGTGAGCGAC CTGACGTATA TCTCAGTGGG TCCGACTTAT GCGTATCTGT ACATCATTAT GGATGCTTTT TCACGAAAGA TCGTGGGTTG GTCTTTTGAG AAGACGATGC ATGCTCAGGG AGCTTTAAGG TCACTGAATA TGGCTTTGTT AGCCCGGAAA GATATCAGCC AGTCGTTGAT CCACCATTCC GATCGGGGCG TCCAATACTG CTCCTGGGCG TACGTGCAAC GATTACGTCA GGTGAATGCG ACCATCAGTA TGACTGAGTC GGGTGATCCA AACGAAAACT CGATGGCTGA GCGCGTGCTT CAGTCCCTAA AAGAGGATTG CAAACTGAGC CGTACCTTTA CTTCTTTCGC GGCAGCAACT GAGGGTATTG AACGAGCGAT TATGGCTTAT AACACGGTTC GTCCGCACGC TTCGCTGAAT TATTTAACTC CGCACCAGAT GCACCAGCGA AAGCGTAAAG TCAAGTTACG CTGGTACCCC TACAAGAAGG TGAGGTACGG AAATGTACAA TATGAGGGGC TCTTACGGTG A
|
Protein sequence | MEVICKLFGR VRQAWYAATR RQEKVGFQTD AILQEVRRIR RDIPGMGTHK LHHEMQVFLT RHRIKLGRDR LHALLKENGM LAKRKAQKVT TTQSNHTHFK YPNKVKNVIP SRANELWVSD LTYISVGPTY AYLYIIMDAF SRKIVGWSFE KTMHAQGALR SLNMALLARK DISQSLIHHS DRGVQYCSWA YVQRLRQVNA TISMTESGDP NENSMAERVL QSLKEDCKLS RTFTSFAAAT EGIERAIMAY NTVRPHASLN YLTPHQMHQR KRKVKLRWYP YKKVRYGNVQ YEGLLR
|
| |