| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3591 |
|---|
| Symbol | |
|---|
| ID | 8727344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 4348313 |
|---|
| End bp | 4350505 |
|---|
| Gene Length | 2193 bp |
|---|
| Protein Length | 730 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | TonB-dependent receptor plug |
|---|
| Protein accession | YP_003388397 |
|---|
| Protein GI | 284038467 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.765405 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0684866 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCA TTTACTTCCT CACCGTTTAC CTGCTTTTAG TACTTACCGC AGCCGCCCAA
ATAAACCTTT CGGGCCGGAT TACCGATGCG AAGGGTCACC CCTTGCCCGG TGCCAATGTG
TTTCTGCGGG GCACCTACGA CGGTGCCAAT ACCGACAGTG CCGGCACGTT TCGCTTTACA
ACCTCCCGAA AGGATACCGC TACCCTGCTG GTCTCCTACA TCGGCTATGA ATCATACGCA
AAAAAGATAC ATACGAACAC GACAGCCCCA TTCATCATCC AGTTAACCGA AGCAGCCAAT
GAACTGAATA CGGTTGTTAT TACCGCCGGG TCGTTTGAAG CATCGGACGA GAAGCGCATG
ACCATGCTGA AGCCGATGGA CATTGTCACG ACAGCCGGTG CCAACGCCGA TATTACAGCC
GCTATGAACC TGCTGCCGGG CACGCAGCGG GTGGGTGAGC AAACCGGCCT GTTTGTACGG
GGTGGCTCAG GCGAAGAAGC CAAAGTTGTG ATCGACGGTA TGATCGTGCA GAATCCGTAT
TTCAGTTCAA TGCCCGATGT GCAGTCGCGC GGGCGGTTCC AGCCGTTTAT GTTTAAAGGT
ACTTCGTTTA GCACGGGCGG TTACTCGGCT CAGTACGGGC AGGCCCTTTC GTCCGTTCTG
TTGCTCAACA CGACCGACAA AACCCAAAAT GAGGGCGTCA GCCTGAGTCT GAATCTGGCT
AATGCAGGCA TTAGCTACGA CCACGCCACC GATAAGTCGT CGATCTCGGC CACCGGCAGT
TACGGCAATC TGAAACCGTT GTTCGCACTG GTCCATCAGA ATATCGACTG GACACACGTA
CCTGAATTTG GTGGTTCCTC CCTTACGTAT CGACTCCAGC CGTCAAAGAC CGGGATGCTC
AAATTCTACG GTATGTATTC AGACAGCAAG CTCGGCATGA ACTTCGTCGA CCCATCCAGC
GAGACTGGCA AAACAGCGCT GCAACAGCAT AATCGCAACT TTTTCACGAC CAGCACGTAT
ACCGACAGCT GGGCTGACGG ACGATGGCTG CTGAACACCG GGCTGTCGTA CAGCTACGAT
GCCGATGCGA CAACGTACAG TGGCGTTGAT TTTGGCCGTT CCAGCGAGCG GTGGCAGGGC
CGGGCCGTTC TGACCCGACT GCTGCCTGCC AACAACTCGC TCCTGTTCGG TGCCGAAGCC
CATGCCATTA CGCTGAAGAA TACTGTACAG GGCATCAACT ATGCTCTGCA TGACAACTAC
GGGGCTATAT TTATTGAATC GCAAACCTAT CTGGGTCGAA AGCTGGCCAT TCAACTTGGT
CTGCGAGGTG AGTATTCATC GGTACTGAGT CGGGCTAATC TGGCTCCCCG TCTGTCGATG
GCTTATAAAA CCGGGCTGTA TAGCCAGGTT TCACTGGCTT ACGGTCAGTT TTACCAGACA
CCCGATTACC GCTACCTGTA TCTGAATAAA TCACTGGATT TTGAACGGGC CGACCACCTG
ATTCTTAACT ACCAGATCAT TAAAAACAAA CGCACCTTCC GGGCCGAAGC CTTCTACAAA
AACTACGCAC AGCTGGTACG GGAGTTCACC GGCCAGCCGG GAATGCCGCC CCAGTATGAT
GCCAACCCGT ATCGTTTTCC CTGGGGTCGG ACCAATAACG GCGGCAACGG CTACGCCCAG
GGTTTTGATG TGTTCTGGCG CGACCAGAAA ACGGTGAAAG GACTCGATTA CTGGATTAGT
TATAGTTACG TAGATACGAA GCGGCTCTTT AAGCAGTTTT TCGTTGCCGC CACGCCAACA
TTTATTTCGA ACCATACTGT AAGCGTGATT ACGAAACGGT ATTTCGAGAA GATCAGTACG
AACCTGGCCA TGACGTACAC CATCAGTAGC GGTCGCCCTT ATTATAATCC TAACCGCCTG
GAGGAAGGCG ACAAGGGTTT TCTGGCCGAC CGAACACCAG TTGTCAACAA CCTCAGCTTT
TCGGCCAGCC ACATCACCCG CATCAGGAAA AATCTGGTGG TTATTTATGC CTCAGTAGAC
AACCTTCTGA ATACGCAAAA CGTGTTTACC TACCGATTTA CCGCAGACGG CAAGACGCGC
TACGCCGTTG GGCCACAGTC GTATCGGAGC TTCTTTGTTG GCGGCATGGT CATGCTCTCG
AAGAAGGCCA AAGTGAATGT TAATGAATTA TAA
|
|---|
| Protein sequence | MKLIYFLTVY LLLVLTAAAQ INLSGRITDA KGHPLPGANV FLRGTYDGAN TDSAGTFRFT
TSRKDTATLL VSYIGYESYA KKIHTNTTAP FIIQLTEAAN ELNTVVITAG SFEASDEKRM
TMLKPMDIVT TAGANADITA AMNLLPGTQR VGEQTGLFVR GGSGEEAKVV IDGMIVQNPY
FSSMPDVQSR GRFQPFMFKG TSFSTGGYSA QYGQALSSVL LLNTTDKTQN EGVSLSLNLA
NAGISYDHAT DKSSISATGS YGNLKPLFAL VHQNIDWTHV PEFGGSSLTY RLQPSKTGML
KFYGMYSDSK LGMNFVDPSS ETGKTALQQH NRNFFTTSTY TDSWADGRWL LNTGLSYSYD
ADATTYSGVD FGRSSERWQG RAVLTRLLPA NNSLLFGAEA HAITLKNTVQ GINYALHDNY
GAIFIESQTY LGRKLAIQLG LRGEYSSVLS RANLAPRLSM AYKTGLYSQV SLAYGQFYQT
PDYRYLYLNK SLDFERADHL ILNYQIIKNK RTFRAEAFYK NYAQLVREFT GQPGMPPQYD
ANPYRFPWGR TNNGGNGYAQ GFDVFWRDQK TVKGLDYWIS YSYVDTKRLF KQFFVAATPT
FISNHTVSVI TKRYFEKIST NLAMTYTISS GRPYYNPNRL EEGDKGFLAD RTPVVNNLSF
SASHITRIRK NLVVIYASVD NLLNTQNVFT YRFTADGKTR YAVGPQSYRS FFVGGMVMLS
KKAKVNVNEL
|
|---|
| |