Gene Slin_3589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3589 
Symbol 
ID8727342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4346738 
End bp4347439 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content51% 
IMG OID 
Productcytidylate kinase 
Protein accessionYP_003388395 
Protein GI284038465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.577192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0958027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGA TAGTCATCGC AATTGACGGT TATTCCAGCT GCGGGAAGAG TACAACCGCA 
AAGGAAGTAG CTGCCCGAAT GGGGTATGGG TATATTGATA CGGGGGCTAT GTACCGGGCC
GTCAGTCTTT TTTTTATTCG GGAGCATGTT TCTCTTTCCA ATACAAGAGA AGTTATGGCT
GCGCTCGACA AGATCCATAT TACATTCAAT CATAACAACC GCACGGGTAA GAACGAAACC
TGCCTCAACG GATTGAATGT AGAGGAGGAG ATCCGTAAAA TGTACATTTC CAACATCGTT
AGTGAAGTAA GCGCCATTCC CGAAGTGCGT TGGGCGATGG TGGCTCAACA ACAGAAAATG
GGCCGTCGGC GCGGGGTCGT AATGGATGGC CGCGATATTG GCACGAAGGT ATTTCCAGAT
GCCGAAGTGA AAGTGTTCAT GACCGCCGAT ACCCACACCC GGGCCAAGCG CCGACAGCAG
GAACTGCTGG CGAAGGGTGA ACTGGTGAAT CTGGAAGATA TTATTAAAAA CCTCGAAAAA
CGCGACCTTA TCGACACTAC TCGTTCCGAA AGCCCGCTGG TACAGGCACC GGATGCCGAG
CTACTCGATA CGTCGCACAT GACCATCGAA GAACAGGTCG ATTGGGTAAT CGAACGGGCC
GACCGGCGGC TGGCCGAACT TCATCGTAAA AAAGTAAAGT AG
 
Protein sequence
MPKIVIAIDG YSSCGKSTTA KEVAARMGYG YIDTGAMYRA VSLFFIREHV SLSNTREVMA 
ALDKIHITFN HNNRTGKNET CLNGLNVEEE IRKMYISNIV SEVSAIPEVR WAMVAQQQKM
GRRRGVVMDG RDIGTKVFPD AEVKVFMTAD THTRAKRRQQ ELLAKGELVN LEDIIKNLEK
RDLIDTTRSE SPLVQAPDAE LLDTSHMTIE EQVDWVIERA DRRLAELHRK KVK