| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3581 |
|---|
| Symbol | |
|---|
| ID | 8727334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 4323371 |
|---|
| End bp | 4325590 |
|---|
| Gene Length | 2220 bp |
|---|
| Protein Length | 739 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003388387 |
|---|
| Protein GI | 284038457 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.1112 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACC GCTGTTTATT GCTTTGTTTT TGGCTGGGCA TGCAGCTCTC CGCTGTTGCC
CAGACGGGTT TGCCTCCCGT TTTTTCGATA CGACCCGACT CCGTACAAAC GCCCGACACA
ACCCACATTC AGGTACTTGA AGATGCCCGT GGGGAGCTGA CCTTTGAGCA GGTACGGCAG
AGTAGTGCGT TTCGGGTAGA GCCTTTCTTC GACCCAACCC GGCGTGCGCA CGTATACTGG
CTTCGGATGC GGCTCAGAAA TACGGGTTCC GATACGCTCA ATCTGTACCT CGGTGATTTC
AGCAGCAACT ACCTCGATAT ATATTGGCTG AATAGCCGCA ACCAGTGGCA GCACCAACGT
ACCGGCGAGC TGGTTCCGCT CAGCCAGGTA CCTTCCCGAA ATGGGAACAA GGAGCGCAAC
CGGCTATTTT TTAGCCTGGC ACCGGGCCAG ACGACCACCC TTTACCAGCG GTCGGAAAAC
GCGTTCTGGC GTCCCCCGCT AACGTATCTG TCAACCCAAC TGCAATCGGA AGAAAGTCGG
ATCAGGGCCG TTTTTAATTA CATTCGGGTA GAGAAGGAAT GGAAGAATTA TTTCTTCGAT
GGCATCATGA TCGGCATTCT GCTGCTGGCC GTTTGTTATA ACCTGCTCAT CTTTTTTTCG
ATAAAAGACA GGGTTTATCT ACACTTCGCT ATCTGTCTTT TCTTCTTTAC GCTGGACCGA
AATGCTTTTT GGATTCAGCA GGCTTTTTTT GAGGAATATC CGTATGTCTT CAATGTACTG
TCTCATTTTT TCTTCCTTAT CTTTTTCATA TTTTTTACTC AGTCGATCCG GAAGTTTATT
CAGCCGGTTC CGGCTTTTCC ACGGTTAAAC AAGGCTATTG GTGGCTTTCT GTTAGTAACT
TCTCTGTTCA TTGTCGTTCT GTTTTTCTCC TTCAACAAGG TGTGGTTTCC ACTGAACGAA
GCAGACGTCC TCATTAATAT TCTGATTCGG GTGGTATATG GTCTATGTAT TATTCTGATT
TTGAAGATGA TGAAAACCGG CTCCGTGGAT GCCCGGTTAG CTCTACTGGC CAACGTCCCG
TTATTTATCT TCTGGCTATT CACCCTGAGT ACGCTGGTTG CTGGCCAGTA TTTTAATGCC
GACATGCTGA AAAGCCTCGG GCGCACATTC GGTTATCTGG AAAGTATATG CTTTGCATGG
CTGATCATTG TTTTCTCCGG TGCACTTATC AATCGCTACA ACCTGACTAA GCAGCGGCTG
GCTCAGCAGA TTATTGAGAA GGAACAACTT GAGCGCGAGC GGGAACTGGA ACGAAGCCGA
CTAATTGAAG AACAGAAAAT TGTATTGGAA CAACAGGTGG AAGAACGGAC CGCCCAGTTA
AAAGCATCCC TCGAAGACCT GCGGATGACG CAGGATCAAT TGGTTCAGAA AGAGAAAATG
GCTTCGTTGG GTGAACTAAC AGCCGGTATT GCCCACGAAA TACAGAACCC ACTCAACTTC
GTGAATAACT TCTCGGAGGT GAGTATCGAA CTGCTCGACG AACTGAAAGA AGGCCCTTTG
CAGCAACTGC CCGATTCAGA GAAAGAGTAT GCCGGTGAGA TTCTGGGCGA CCTGACGCAG
AATCTGGAGA AGATCACTCA CCATGGAAAC CGGGCCAGCA GCATTGTAAA GGGTATGCTG
GCACATAGCC GGACAGCAGA CGGCGAACGC CGACCGACCG ATCTCAATGC GCTGGCCGAT
GAATTCATGC GCCTGTCGTA TCATGGTCTC CGCGCAAAAG ACAAAACCTT CAACTGCGAA
CTGGCAACCC AATTTATCCC AAACCTGCCG CTGGTAACCG TTGTGACACA GGATATAGGC
CGGGTGTTGC TGAACCTGTT CAACAATGCT TTTTACGCCG TTTCGGAAAA AAAGAAACAG
CTCGATGCTG TGGGTGAAAC GGGTTATAAA CCAACGGTCA GCATCAGTAC AAAACAGGTT
GGAAAGACCG TAGAAATCCG GGTGACCGAT AATGGTACCG GTATTCCGGA GGCTGTGAAA
ACCAAAATAT TTCAGCCCTT TTTTACCACC AAGCCAGCGG GAAGCGGCAC CGGGCTGGGC
CTGTCGCTAT CGTACGACAT TGTCACAAAG GGGCACGGTG GACTGCTGAC CGTTGAAAGT
GATTCCACTA CCGGAACCGC CTTTACGCTG GCTTTACCGG TCGACCGGGA TAGTGAATAG
|
|---|
| Protein sequence | MKNRCLLLCF WLGMQLSAVA QTGLPPVFSI RPDSVQTPDT THIQVLEDAR GELTFEQVRQ
SSAFRVEPFF DPTRRAHVYW LRMRLRNTGS DTLNLYLGDF SSNYLDIYWL NSRNQWQHQR
TGELVPLSQV PSRNGNKERN RLFFSLAPGQ TTTLYQRSEN AFWRPPLTYL STQLQSEESR
IRAVFNYIRV EKEWKNYFFD GIMIGILLLA VCYNLLIFFS IKDRVYLHFA ICLFFFTLDR
NAFWIQQAFF EEYPYVFNVL SHFFFLIFFI FFTQSIRKFI QPVPAFPRLN KAIGGFLLVT
SLFIVVLFFS FNKVWFPLNE ADVLINILIR VVYGLCIILI LKMMKTGSVD ARLALLANVP
LFIFWLFTLS TLVAGQYFNA DMLKSLGRTF GYLESICFAW LIIVFSGALI NRYNLTKQRL
AQQIIEKEQL ERERELERSR LIEEQKIVLE QQVEERTAQL KASLEDLRMT QDQLVQKEKM
ASLGELTAGI AHEIQNPLNF VNNFSEVSIE LLDELKEGPL QQLPDSEKEY AGEILGDLTQ
NLEKITHHGN RASSIVKGML AHSRTADGER RPTDLNALAD EFMRLSYHGL RAKDKTFNCE
LATQFIPNLP LVTVVTQDIG RVLLNLFNNA FYAVSEKKKQ LDAVGETGYK PTVSISTKQV
GKTVEIRVTD NGTGIPEAVK TKIFQPFFTT KPAGSGTGLG LSLSYDIVTK GHGGLLTVES
DSTTGTAFTL ALPVDRDSE
|
|---|
| |