| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3574 |
|---|
| Symbol | |
|---|
| ID | 8727327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 4311557 |
|---|
| End bp | 4312414 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | UspA domain protein |
|---|
| Protein accession | YP_003388380 |
|---|
| Protein GI | 284038450 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACTTAT CCTTAACTCA GGTAAAACTC CTTCGTATGA AAACCATCGT TTTAGCTACC
GATTTCTCGC CGAATGCGAA TAAAGTCGCT CATTTTGCCA TGCAACTGGC TCTTACCCAA
CAGGCGACCT TAATTTTGAT GCATGCGTTT CATTTCTGGC CCACCAATCC GGCTGAAACG
GGAGCAGACT TCCCGCTCAG TGCCAAAGCC ATGCACAACG ATAGCCAGAA AACGCTCAAC
CACCTGGCTC ACACCTTAAA TGAACAATAT GGAACTGAGG TGAACATTCG CTGTATCACC
AAAGAAGGTT ACCCCATACC GGCCATTCGG GAGGTTGCTG AAGAGGAAAA GGCCGATTTG
GTTATCATGT CCACAACGGG TACCGCTCCC CAGAGTGCTC AGCTAATGGG CAGTGTGGCA
ACGAGTATGG TGGCCGAAAC CAATGTTCCC CTGCTGCTTG TTCCGCCTTC CGTTAGGTAT
ACCGACGTTA AAAATGTAGT GCTGGGCGTA GACCTCGATA CACCCCCTAA TGCTGTTGCT
CTGGATACGG CGCTTCGGTT TGCCCGACAG TTTGGCTGCG TGGTCAACCT GCTGTGCATT
CACCCGCATC CGGCCGAGGC CCATATCCGC ACGAAGGCCG AACACATTCG GGAGCTGATG
GTGTCTGTTC CGCATACGAT GACGATTCTG TCCGGCGAAG AGATTTATGA TACGCTGCTC
ACCTTTGCGC ACGAGAACAA AGCCGACCTG ATTATGATGC TGCCTCAGGC ACACAGTTGG
TTCAGACGGC TATTTGTGGA GGGCGAAACT GAGCGGTTTG CCCGACTGAC TGATATTCCG
CTGCTGGCTA TCGTATAA
|
|---|
| Protein sequence | MYLSLTQVKL LRMKTIVLAT DFSPNANKVA HFAMQLALTQ QATLILMHAF HFWPTNPAET
GADFPLSAKA MHNDSQKTLN HLAHTLNEQY GTEVNIRCIT KEGYPIPAIR EVAEEEKADL
VIMSTTGTAP QSAQLMGSVA TSMVAETNVP LLLVPPSVRY TDVKNVVLGV DLDTPPNAVA
LDTALRFARQ FGCVVNLLCI HPHPAEAHIR TKAEHIRELM VSVPHTMTIL SGEEIYDTLL
TFAHENKADL IMMLPQAHSW FRRLFVEGET ERFARLTDIP LLAIV
|
|---|
| |