Gene Slin_3564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3564 
Symbol 
ID8727317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4298192 
End bp4298941 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content54% 
IMG OID 
Productfatty acid desaturase 
Protein accessionYP_003388370 
Protein GI284038440 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.392803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.531214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATTA TTGCTTTTTT CCTGGCGCAC TGGTATCTGT CGGTACTGAT GCAAACGTTT 
TTTCTCCACC GCTATGCCGC TCACCAGATG TTTACCATGA GCCCCGGCTG GGAAAAGTTT
TTCTACGTAC TCACGTTCAT CGGGCAGGGG TCGTCGTTTC TGAGCCCCCG CGCCTACGGC
ATCATGCACC GGCTCCACCA CGCCCACGCC GATACGGAAT TTGACCCCCA CTCGCCGGAG
TATTCCAATA ACCTGTTCGA CATGATGTGG AAAACCCGGA CGTTTTATAA CGACATCCTG
AATAACCGCG ATACGATTCC GGCGAAGTTC AAAAAGGGAG TGCCTAACTG GCCGTTTATG
GAATGGTTCG GCGACCGCTG GCCCGTACGG CTGGCCTGGG GTACGGCCTA TACGCTGTTC
TATATTCAGT TTGCGCCTTC CCCCTGGTAT TTCCTGCTGC TCCCGGTGCA TTTCCTGATG
GGACCGGTAC ATGGGGCCAT CATCAACTGG TACGCGCACC GCTACGGCTA CACGAATTTT
AAACTGAATG ATACGGCCAA AAACCTGCTG CCGTTCGATT TTCTGATGAT GGGCGAATCG
TACCACAACA ACCACCACAA GTATGGTGGA CGGCCCAACT TCGGTGGGTT CCGCTGGCAC
GAATTCGACC CCGCCTACCC GCTTATTCTG TTGCTCAACA AAATAGGGGT GCTAAAACTC
CGGCTCGGAC GCGACGAAGC GTATATGTAG
 
Protein sequence
MIIIAFFLAH WYLSVLMQTF FLHRYAAHQM FTMSPGWEKF FYVLTFIGQG SSFLSPRAYG 
IMHRLHHAHA DTEFDPHSPE YSNNLFDMMW KTRTFYNDIL NNRDTIPAKF KKGVPNWPFM
EWFGDRWPVR LAWGTAYTLF YIQFAPSPWY FLLLPVHFLM GPVHGAIINW YAHRYGYTNF
KLNDTAKNLL PFDFLMMGES YHNNHHKYGG RPNFGGFRWH EFDPAYPLIL LLNKIGVLKL
RLGRDEAYM