Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3526 |
Symbol | |
ID | 8727279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4260701 |
End bp | 4262032 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | nucleotide sugar dehydrogenase |
Protein accession | YP_003388332 |
Protein GI | 284038402 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTAG CTGTTGTTGG AACCGGATAT GTAGGACTTG TAACAGGTAC GTGCTTTGCC GAAACTGGAA ATCAGGTTAC CTGTGTAGAC ATTGATGAGC GCAAAGTAGG AAAACTTAAT AACGGGATTG TTCCTATTTA TGAACCAGGT TTAGAAACCT TGTTTCATCG GAATGTTGAA GAAGGTCGGT TGACATTCAC CACAGATTTG GAAGAAGGAA TCAAGGGAGC CGAGGTTATC TTTTTAGCCT TACCAACTCC TCCGGGTGAG GATGGCTCCG CTGATCTGAA ATATATCCTG AAAGTAGCCA GTGACCTGGG CCCAATATTG AGCCAATACG CTGTAATTGT TGACAAGAGC ACTGTACCTG TTGGCACAGC TGAGAAAGTA CACGCGCACA TTGCTGATAA TGCCAAAGTA GATTTCGACG TCGTTTCGAA CCCCGAGTTC CTCCGTGAAG GTGTTGCCGT TGAAGATTTC ATGAAGCCTG ATCGGGTTGT GATCGGGACG AAGTCGGACC GGGCCAAGGC TGTTATGAAC CGACTTTACG CACCGCTGGT ACGGCAGGGT AACCCCGTCA TTTTCATGGA CGAGCGTTCC GCTGAGATGA CCAAGTATGC CGCCAACGCA TTCCTGGCTA CGAAAATTAC GTTTATGAAC GAAATCGCCA ACCTGTGCGA GCGGGCCGGT GCAAACGTAG ACGATATCCG TCGGGGTATT GGAACGGACA GCCGCATTGG GAAACGATTC CTGTTTGCCG GTATCGGATA CGGCGGTAGC TGCTTCCCGA AAGATGTGCA GGCGCTGGCG AAAACAGCCA AGGACTTTGA CTACGATTTC AAAGTACTGA AATCGGTGAT GGAGGTCAAC TACGAGCAGA AGACGAAGCT TATGCCATTG ATCCTCAATC ATTTTGGCGG TGACCTGAAA GGAAAGACGA TTGCTGTCTG GGGATTGGCC TTCAAACCCT ATACCGACGA CATTCGCGAA GCCCCCGCTC TGGATAACAT TAAAGCGTTG ATTGATGCAG GTGCCAAAGT GACGGTTTAT GATCCGGAAG CTATGGACAA CGTACGGGAA CAGATCGGTA ATGCTGTAAC CTACGCCCAT ACGCAGTATG CCGCTCTCGA CGATGCCGAT GCACTGGTAA TCATCACCGA ATGGCCGTTG TTCCGCACGC CTGATTTCGA TAAAATGAAT CTTTTATTGA AAAATAAAGT AATTTTCGAC GGGCGTAACG TATATGAGCT GGATCAGATG ATCGAGCAGA ATTATACGTA CTACTCCGTG GGCCGTGAAC CAATTATGGC CCCAGTCGAG CAAAAAGTCT AA
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Protein sequence | MKLAVVGTGY VGLVTGTCFA ETGNQVTCVD IDERKVGKLN NGIVPIYEPG LETLFHRNVE EGRLTFTTDL EEGIKGAEVI FLALPTPPGE DGSADLKYIL KVASDLGPIL SQYAVIVDKS TVPVGTAEKV HAHIADNAKV DFDVVSNPEF LREGVAVEDF MKPDRVVIGT KSDRAKAVMN RLYAPLVRQG NPVIFMDERS AEMTKYAANA FLATKITFMN EIANLCERAG ANVDDIRRGI GTDSRIGKRF LFAGIGYGGS CFPKDVQALA KTAKDFDYDF KVLKSVMEVN YEQKTKLMPL ILNHFGGDLK GKTIAVWGLA FKPYTDDIRE APALDNIKAL IDAGAKVTVY DPEAMDNVRE QIGNAVTYAH TQYAALDDAD ALVIITEWPL FRTPDFDKMN LLLKNKVIFD GRNVYELDQM IEQNYTYYSV GREPIMAPVE QKV
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