Gene Slin_3526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3526 
Symbol 
ID8727279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4260701 
End bp4262032 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content49% 
IMG OID 
Productnucleotide sugar dehydrogenase 
Protein accessionYP_003388332 
Protein GI284038402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAG CTGTTGTTGG AACCGGATAT GTAGGACTTG TAACAGGTAC GTGCTTTGCC 
GAAACTGGAA ATCAGGTTAC CTGTGTAGAC ATTGATGAGC GCAAAGTAGG AAAACTTAAT
AACGGGATTG TTCCTATTTA TGAACCAGGT TTAGAAACCT TGTTTCATCG GAATGTTGAA
GAAGGTCGGT TGACATTCAC CACAGATTTG GAAGAAGGAA TCAAGGGAGC CGAGGTTATC
TTTTTAGCCT TACCAACTCC TCCGGGTGAG GATGGCTCCG CTGATCTGAA ATATATCCTG
AAAGTAGCCA GTGACCTGGG CCCAATATTG AGCCAATACG CTGTAATTGT TGACAAGAGC
ACTGTACCTG TTGGCACAGC TGAGAAAGTA CACGCGCACA TTGCTGATAA TGCCAAAGTA
GATTTCGACG TCGTTTCGAA CCCCGAGTTC CTCCGTGAAG GTGTTGCCGT TGAAGATTTC
ATGAAGCCTG ATCGGGTTGT GATCGGGACG AAGTCGGACC GGGCCAAGGC TGTTATGAAC
CGACTTTACG CACCGCTGGT ACGGCAGGGT AACCCCGTCA TTTTCATGGA CGAGCGTTCC
GCTGAGATGA CCAAGTATGC CGCCAACGCA TTCCTGGCTA CGAAAATTAC GTTTATGAAC
GAAATCGCCA ACCTGTGCGA GCGGGCCGGT GCAAACGTAG ACGATATCCG TCGGGGTATT
GGAACGGACA GCCGCATTGG GAAACGATTC CTGTTTGCCG GTATCGGATA CGGCGGTAGC
TGCTTCCCGA AAGATGTGCA GGCGCTGGCG AAAACAGCCA AGGACTTTGA CTACGATTTC
AAAGTACTGA AATCGGTGAT GGAGGTCAAC TACGAGCAGA AGACGAAGCT TATGCCATTG
ATCCTCAATC ATTTTGGCGG TGACCTGAAA GGAAAGACGA TTGCTGTCTG GGGATTGGCC
TTCAAACCCT ATACCGACGA CATTCGCGAA GCCCCCGCTC TGGATAACAT TAAAGCGTTG
ATTGATGCAG GTGCCAAAGT GACGGTTTAT GATCCGGAAG CTATGGACAA CGTACGGGAA
CAGATCGGTA ATGCTGTAAC CTACGCCCAT ACGCAGTATG CCGCTCTCGA CGATGCCGAT
GCACTGGTAA TCATCACCGA ATGGCCGTTG TTCCGCACGC CTGATTTCGA TAAAATGAAT
CTTTTATTGA AAAATAAAGT AATTTTCGAC GGGCGTAACG TATATGAGCT GGATCAGATG
ATCGAGCAGA ATTATACGTA CTACTCCGTG GGCCGTGAAC CAATTATGGC CCCAGTCGAG
CAAAAAGTCT AA
 
Protein sequence
MKLAVVGTGY VGLVTGTCFA ETGNQVTCVD IDERKVGKLN NGIVPIYEPG LETLFHRNVE 
EGRLTFTTDL EEGIKGAEVI FLALPTPPGE DGSADLKYIL KVASDLGPIL SQYAVIVDKS
TVPVGTAEKV HAHIADNAKV DFDVVSNPEF LREGVAVEDF MKPDRVVIGT KSDRAKAVMN
RLYAPLVRQG NPVIFMDERS AEMTKYAANA FLATKITFMN EIANLCERAG ANVDDIRRGI
GTDSRIGKRF LFAGIGYGGS CFPKDVQALA KTAKDFDYDF KVLKSVMEVN YEQKTKLMPL
ILNHFGGDLK GKTIAVWGLA FKPYTDDIRE APALDNIKAL IDAGAKVTVY DPEAMDNVRE
QIGNAVTYAH TQYAALDDAD ALVIITEWPL FRTPDFDKMN LLLKNKVIFD GRNVYELDQM
IEQNYTYYSV GREPIMAPVE QKV