| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3519 |
|---|
| Symbol | |
|---|
| ID | 8727272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 4254092 |
|---|
| End bp | 4255309 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | Saccharopine dehydrogenase |
|---|
| Protein accession | YP_003388325 |
|---|
| Protein GI | 284038395 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.368548 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAACG TGCTCATTAT TGGAGCCGGT GGAGTTGGCA GCGTTGTAGC GCACAAATGC
GCGATGAACA GCGATGTCTT CACAACGATT ATGCTGGCTA GCCGCACCAA ATCAAAGTGC
GACCGTATTG CGGCCGAAAT TCAGGAAATG CACGGCGTAA GCATTCAAAC GGCTCAGGTC
GATGCCGATG TGGTGTCCGA AATGGTCGAG CTTATCCGGT CGTTCAAGCC CGTACTGGTC
ATCAACGTGG CCCTCCCCTA CCAGGACCTT CCCATCATGG ATGCCTGCCT CGAAGCCGGT
GTACACTACA TGGACACGGC AAATTACGAA CCAAAGGATG TAGCCAAGTT TGAATATAGC
TGGCAGTGGG CCTATAAAGA ACGCTTCGAA CAGGCGGGAT TGATGGCGTT GCTGGGCTGC
GGCTTCGATC CCGGCGCTAC GCAGGTGTTT ACGGCTTACG CCAATAAACA TTACTTCGAC
CGGATGGACT ACCTGGACAT TATCGACTGC AACGCGGGCA ACCACGGCAA AGCTTTCGCC
ACCAACTTCA ACCCGGAGAT TAACATTCGC GAAATCACGC AACCCGGTCG CTATTGGGAA
AACGGCGAGT GGGTCGAGAT TCCGGCCATG AGCATTCATA AGCCCATCGA CTACCCCGAA
ATCGGCGAGC GCGAGTCGTA TGTGCTGTAC CACGAAGAGC TGGAATCGCT GGTTAAAAAC
TTCCCGACCC TCAAGCGGGC GCGTTTCTGG ATGACCTTCG GACAGGCGTA TCTGACCCAC
CTCGAAGTGC TTCAGAACGT GGGCATGACG CGCATCGACA AAGTGAAATT TCAGGGTATG
GACGTTGTTC CCCTCGAATT CCTGAAAGCT GTGCTGCCCG CTCCCGACTC TCTGGGCGAA
AATTACACGG GCCAAACCAG CATCGGTTGC CAGATTAAAG GCGTTAAAGA TGGCGAAGAT
GTTACCTGCT ATATCTGGAA CAACTGCGAC CATGCTGAGA CCTACCGTGA AGTACGCGGG
CAAGCGGTAA GCTACACCAC GGGCGTTCCG GCCATGATTG GAGCCATGCT GATGCTGAAA
GGCATCTGGA TGAAACCCGG CGTATGGAAC TGCGAAGAAC TAGACCCCGA TCCGTTTATC
GAACAGATGA ACAAGCAGGG GCTTCCGGTT CAGGAACGTG TAAATATTCC ACTCCCGCAC
GAATATCCGG AAGTTTAA
|
|---|
| Protein sequence | MANVLIIGAG GVGSVVAHKC AMNSDVFTTI MLASRTKSKC DRIAAEIQEM HGVSIQTAQV
DADVVSEMVE LIRSFKPVLV INVALPYQDL PIMDACLEAG VHYMDTANYE PKDVAKFEYS
WQWAYKERFE QAGLMALLGC GFDPGATQVF TAYANKHYFD RMDYLDIIDC NAGNHGKAFA
TNFNPEINIR EITQPGRYWE NGEWVEIPAM SIHKPIDYPE IGERESYVLY HEELESLVKN
FPTLKRARFW MTFGQAYLTH LEVLQNVGMT RIDKVKFQGM DVVPLEFLKA VLPAPDSLGE
NYTGQTSIGC QIKGVKDGED VTCYIWNNCD HAETYREVRG QAVSYTTGVP AMIGAMLMLK
GIWMKPGVWN CEELDPDPFI EQMNKQGLPV QERVNIPLPH EYPEV
|
|---|
| |