Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3513 |
Symbol | |
ID | 8727266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4247343 |
End bp | 4249283 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003388319 |
Protein GI | 284038389 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA ACGCCTGTTT CAGCGTCGTA CTATTCCTGT TGGCTATCTC CATCACACAG GCGCAGCACT GGTACAAAGG TAATCTACAC ACGCACTCGC TCTGGAGCGA CGGTGACGAT TATCCCGAAA TGATCATGGA CTGGTACAAG GCCAATGGCT ACCAGTTCGT TGGGTTGTCC GACCATAACA TCATTCAGGA CGTTGATAAA TGGGTAAACG TACCTCGCCA GCCAGATCGA CGCCGGACGT TCGACCGGTA TCTGCGCACG TTCGGGCCGG ATTGGGTGAC GTACCGAAAA GGGCAAAATG ACTCGCTGAG TGTCCGGCTC AAACAACTGC ACGAATACCG GAATTATTTT GAAGAGCCGG GGAAGTTTCT GATCCTGAAA AGTGAAGAGG TATCGACGGG CTATCAGGGT AAGCCCATAC ACATGAACGT GACGAATGTA AAGAATCTCA TTCGGCCGTT GCCAGGAAAC AGCGTGGCTG ACGTCATGCA AAACAACATC GACATGGTGG TAGCACAACG ACGGTTGACG GGTCAGCCCA TGTTTCCGCA CATTAACCAC CCTAATTTTT ACTACGCCAT CAAAGCTGAA GACCTGATGC AGCTCCGGTA CGAACGCTTC TTTGAAGTCT TCAATGGGCA TCATCTGGTC AATAATTACG GCGACAGCAC CCACGAAGGC ACGGAGGCCA TGTGGGATAA AATCAACCTG CATTTTCTGC AACAAGCCCG CCCGCTGATG TATGGGTTGG GTACAGATGA CAGCCACAAT TACTACTTTT TCGGGCCTGA GTTCAGCAAT TCGGGTCGAA GCTGGGTGAT GGTCGACGCC CCCGAACTGA CCCCGAAGTC GTTGGTTGAA TCTATGGAAG CCGGTCGTTT TTACGCTACC TCGGGCGTCA CACTGAAACA GTTACCACAA ATGGGAAACA AGCTGGTCGT GCGGGTTAAA ACCGAACCCG ACGTGACATA TCGCATTCAG TTTTTTGGCG TCAGAAAAGG TAGTACACAG GCCGAGCTGC TCCGCGAAGT GATTGATACA GCCGCCATCT ATGCCCTGAC GGATGATGTG CTCCTGCTTC GGGCGAAGAT CATTTCCAGC AAGCCCAAGT TCAACCCGTT TATGCCGGGG GATGTTGAAA CCGCCTGGAC ACAGCCTATC GCCCAAGCCA TTGTCCCCCA GCAGCCTGCC GGGGTAGTGC CGCTTATGAA CGCCCATGCC CATAACGACT ACGAGCAGTC GCGCCCGCTT TGGGATGCGC TGGATAACGG TTTCACCAGT GTTGAAGCCG ACGTGCATCT GATTGATGAT AACCTGTATG TAGCGCACGA CCGGCCAACC ATCAAAAATC CGGCGGCTAC CCTCGAAAAC CTGTACCTCA AACCGCTGGC CGAGCGAATC CGGCAAAATG GCGGCCAGGT GTTTCCAATG TATAAAGGGC CGTTTTACCT GATGATCGAC GCCAAAACCA ACGCCGACAG CACCTTCAAC GCGTTAATGA AGGTCTTGCA GCGCTATAAG TCGCTGATTG TTGGTGATAG AAAGGGTAGT GCCGGGGTGG TCAGCATCGT GTTGTCCGGT AACAGACCCG TGGCCGCAAT GGCAAAGGTG AAGCAACCGC TGATGGCGAT AGATGGTCGT CCTGCCGATC TTGGCAAGGG GTATAACGCC GTTCTGATGC CGATAATCAG CGATTCCTAT CCAAACCAGA TTCGGTGGCG GGGAAAGGGC GACATGCCAG CGGACGAGTT TCAGAAACTG CGCCAACTGG TTGATCAGGT ACATCAGCAA GGGAAAAAGC TACGGCTCTG GGCGAGTCCC GAAGACCCGC TCGTTTGGGC AAAACTCCGT GAAGCGGGCG TTGATTTTAT CAGTACGGAT CAACAAGTGC TGGTGCGGGA TTTTTTGCTG AAGATGAGTG CTGGGAAATG A
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Protein sequence | MKKNACFSVV LFLLAISITQ AQHWYKGNLH THSLWSDGDD YPEMIMDWYK ANGYQFVGLS DHNIIQDVDK WVNVPRQPDR RRTFDRYLRT FGPDWVTYRK GQNDSLSVRL KQLHEYRNYF EEPGKFLILK SEEVSTGYQG KPIHMNVTNV KNLIRPLPGN SVADVMQNNI DMVVAQRRLT GQPMFPHINH PNFYYAIKAE DLMQLRYERF FEVFNGHHLV NNYGDSTHEG TEAMWDKINL HFLQQARPLM YGLGTDDSHN YYFFGPEFSN SGRSWVMVDA PELTPKSLVE SMEAGRFYAT SGVTLKQLPQ MGNKLVVRVK TEPDVTYRIQ FFGVRKGSTQ AELLREVIDT AAIYALTDDV LLLRAKIISS KPKFNPFMPG DVETAWTQPI AQAIVPQQPA GVVPLMNAHA HNDYEQSRPL WDALDNGFTS VEADVHLIDD NLYVAHDRPT IKNPAATLEN LYLKPLAERI RQNGGQVFPM YKGPFYLMID AKTNADSTFN ALMKVLQRYK SLIVGDRKGS AGVVSIVLSG NRPVAAMAKV KQPLMAIDGR PADLGKGYNA VLMPIISDSY PNQIRWRGKG DMPADEFQKL RQLVDQVHQQ GKKLRLWASP EDPLVWAKLR EAGVDFISTD QQVLVRDFLL KMSAGK
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