| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3502 |
|---|
| Symbol | |
|---|
| ID | 8727255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 4237377 |
|---|
| End bp | 4238213 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_003388309 |
|---|
| Protein GI | 284038379 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTTTC GTGTCATTCA GCCCAGTCCA TTCTTACGGC AGTATATCCG TAGCTACATG
CTATGTCATA TTGATGTCGA CCCATCATTA CCTGCTCCGG TAAAGGCCTA TCCGGTTACG
CCTGAAGAAG GTATGACATT TCATATAAGA GGGCAGCTCC GGGCCGAAAC ACCCGAACTG
AACTTACTGG AAAAACGGGC AAAAACCGTT TTTTTCGGTT GCCCGAATGC CCGTCAAAAC
CTCATACTGT CTCATGAGTT TATGCTGGCT CATGTCTGGT TTATGCCGGG GGCGTTGTAT
AAACTACTTC AGGTTCCGAT GAGCGAATTC GTGCATCAAA ATATTGACGC CGAACTAATC
TGGGGCCGAG ATATTCGGGA GGTGAACGAT CAGTTGGCCA ATGCACCAGA CTATGACAGC
ATATTTCGGA TACTGGACGC TTTCTTCTGG AAAAAAACCA GTCGGCTCAG CGATGATAAC
CGGCCAATAG ACCGCATTGG ACAACTGATT TTTGATAACC CACAAGGGTT TCGACTAGAT
AAAGTTGCGG ATCAGGCGTG TTTGAGCCAG CGCCAGTTTG AGAAGCGGTT TATTCAACAG
GTAGGGGTTA GCCCCAAGTT CTTTGCCCGC ATCAGCCGGT TCTGGAAAGC CTATAAACTA
AAGGAAAATA ACCCCACGCT CGACTGGCTG AGTATCGCGA TCCAGTTTGG GTATGTGGAT
GTTCAGCATC TTGTCAAGGA TTGCAGGCAA TTTGCCAATA CTACACCGAA CATATTGATG
AAAGAGAACG CTCAAAGTCC CGAATTTTAT CCAGGTATCG CGGTCTATCG TCCGTAA
|
|---|
| Protein sequence | MVFRVIQPSP FLRQYIRSYM LCHIDVDPSL PAPVKAYPVT PEEGMTFHIR GQLRAETPEL
NLLEKRAKTV FFGCPNARQN LILSHEFMLA HVWFMPGALY KLLQVPMSEF VHQNIDAELI
WGRDIREVND QLANAPDYDS IFRILDAFFW KKTSRLSDDN RPIDRIGQLI FDNPQGFRLD
KVADQACLSQ RQFEKRFIQQ VGVSPKFFAR ISRFWKAYKL KENNPTLDWL SIAIQFGYVD
VQHLVKDCRQ FANTTPNILM KENAQSPEFY PGIAVYRP
|
|---|
| |