Gene Slin_3496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3496 
Symbol 
ID8727249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4229075 
End bp4229881 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content56% 
IMG OID 
Productphosphomethylpyrimidine kinase 
Protein accessionYP_003388303 
Protein GI284038373 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.828772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAT ACGCACGCGC CTTAACCATT GCAGGCTCCG ATAGTGGTGG TGGAGCCGGT 
ATCCAGGCCG ATCTCAAAAC CTTTGCCGCG CTCGGCTGCT ACGGCATGTC GGTAATTACG
GCCCTGACGG CCCAGAATAC GAAAGCGGTA ACGGGCATTA TGCCGGTGTC TCCGGCGTTC
ATTGCCGAAC AGATGAAGGC CGTGTTGAGC GACATTGGTG CCGATGCGGT GAAAATTGGT
ATGCTGCATT CGGCGGAAGT CATTGAACAG GTGGCAAAAA CGCTGGTCGA TTTTGGCGTT
AAAACGATTG TTTTAGACCC CGTTATGGTG GCCAAAAGCG GGGATAAACT ATTGCAGGAT
GAAGCTGTCG ACGCGCTCAA AACGTACTTG CTCCCCATAG CATCTGTCAT TACGCCCAAC
CTGCCCGAAG CCAGTGTGTT GCTGGGGCGA CCGGTCGAGA CGATGGCCGA TATGCAGCAG
GCCGCCGTCG ATCTGGCAAC GCTCTGCCCG GGCGCCATTC TGGTGAAAGG AGGCCACCTG
ACAACGGACG AAAGTACTGA TCTGCTGTAC CTATCGGCTA CAGAACAGCA CTCCTTCCCA
ACAACTCGCA TACAAACCGG CAACTCGCAC GGAACGGGCT GTACGCTCTC GTCGGCCATT
GCGGCTGGGT TGGCCCGAGG CTTGTCAGTC GTTGATGCGG TAGCTGTGGC CAAAGACTAT
TTAACTCAGG CCCTTCGCGC GGGCGCTGAT TACCAACTCG GGCATGGCCA CGGGCCTGTT
CACCATTTTT TCAACGTCTG GCAATAG
 
Protein sequence
MKTYARALTI AGSDSGGGAG IQADLKTFAA LGCYGMSVIT ALTAQNTKAV TGIMPVSPAF 
IAEQMKAVLS DIGADAVKIG MLHSAEVIEQ VAKTLVDFGV KTIVLDPVMV AKSGDKLLQD
EAVDALKTYL LPIASVITPN LPEASVLLGR PVETMADMQQ AAVDLATLCP GAILVKGGHL
TTDESTDLLY LSATEQHSFP TTRIQTGNSH GTGCTLSSAI AAGLARGLSV VDAVAVAKDY
LTQALRAGAD YQLGHGHGPV HHFFNVWQ