Gene Slin_3494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3494 
Symbol 
ID8727247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4227655 
End bp4228461 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content56% 
IMG OID 
Producthydroxyethylthiazole kinase 
Protein accessionYP_003388301 
Protein GI284038371 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.862853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCAAT ACCCTCAATC AATCTGGGCC GACGTTGAGC GCATCCGCGT GCAGGCTCCG 
CTTGTCCATA ACATTACCAA CTTCGTGGTG ATGAACAACA CCGCCAATGC CCTGCTGGCG
TTAGGGGCCT CGCCCGCTAT GGTTCATGCC CCCGAAGAAG TGGAAGACTT TGTCGCCATT
TCCAGTGCGC TTGTCGTCAA CATCGGCACG CTCGATGCCA CGTTCGTAGC CGGTATGCGA
CTGGCGATGC AAAAGGCAAA GGCATTGGGT AAGCCCGTCA TTTTTGATCC GGTAGGTGTG
GGTGCTACGG CCTACCGTAA TCAGGTAAGT GCGGAATTGC TGGCCCTGGC AGCCCCCGAT
GTGATTCGGG GTAATGCCTC CGAAATTATG GCACTGGCCG GTCTGAACGC CCAAACCAAG
GGCGTCGACA GTCTGTATGG ATCGGAAGCC GCCGTCGACG CAGCCCGGCG ATTGAGTGCT
CTGACAGGCG GTGTGGTGGT GATCAGTGGT GAGAACGATT ACATCATTCA GGGCGAGAAA
ACGGCTACCA TCGGCAACGG CCATCCGCTC ATGACGAAAG TGACCGGCAT GGGCTGTACC
GCCACTGCCC TGACCGGTGC CTTTGCCGCC GTTAATCCCG ATTATTTTCA GGCAGCAACC
CACGCCATGG CCGTTATGGG CATTGCGGGC GAACTGGCTG TTGAGAAAAA ACTGGCTCCC
GGCAGTCTTC AACTCAACTT TCTTGATGCT CTCTATGAAC TGACAGAAGA TACGATTACA
ACCCGGCTCC AACTGACACA GGCGTGA
 
Protein sequence
MIQYPQSIWA DVERIRVQAP LVHNITNFVV MNNTANALLA LGASPAMVHA PEEVEDFVAI 
SSALVVNIGT LDATFVAGMR LAMQKAKALG KPVIFDPVGV GATAYRNQVS AELLALAAPD
VIRGNASEIM ALAGLNAQTK GVDSLYGSEA AVDAARRLSA LTGGVVVISG ENDYIIQGEK
TATIGNGHPL MTKVTGMGCT ATALTGAFAA VNPDYFQAAT HAMAVMGIAG ELAVEKKLAP
GSLQLNFLDA LYELTEDTIT TRLQLTQA