Gene Slin_3490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3490 
Symbol 
ID8727243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4223679 
End bp4224473 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content46% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388297 
Protein GI284038367 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.425617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGGA CGATTACTAC TAGTCTGCTA ACTCTCGTTG TTATGGGTTT GGCGGTTTTT 
TCCTGTCATG AAACAGACGT GGCACCAACG GGTAGGATGC GGCTTGCATT CGATAATGTT
GCGGGTGCCT CCGATCTGAA ACTAAACTCC GGAATGTATC AGAATGCTTC GGGAGAGTCG
TTTTCCATAA CGAAATTCAA CTATTTCGTC AGTAACATCC GCCTTCGGAA AGACGATGGT
AGTGAGTTCG TGGTGCCTCA GGATAGTAGC TACTTTCTGA TTCAGGAAGA TAAACCTGCT
TCGCAGACAA TCGCTTTATC GAACATCCCG GCCGGGAATT ATACGGGCAT TACCTTTGTC
GTTGGGGTCG ATAGCGCCCG TAGCATGGCC GACATTAGTA AGCGGACAGG CGTTCTTGAT
CCAGCCTTGA ATAACGGCAT GTATTGGGAC TGGAATTCGG GCTATATTTT TATGAAGATA
GAAGGTACGT CGACTGTAGC ACCTGCTGCT CAGAATAACG CATTTTTTTA TCACATTGGC
GGCTTTGGGC GGGCTAACGT CAAGATAAAC AACATACGAA CAGTGTCTTT GCCCTTTACG
GGTACTGTTG CCCATGTGGA GTCCGGTTCC ACACCGACAA TAGGTTTGAA AACGGATGTG
CTGAAGATTT TCAACGGACC GACTAAACTG AGTATCGCCC AAAATCCGTC GGTTATGTTT
GATCTGTACT CAACGAATAT TGCCGATAAT TACGCGCAGA TGTTTAGCTA CGACAAGATC
CTTACGAATC AATGA
 
Protein sequence
MKWTITTSLL TLVVMGLAVF SCHETDVAPT GRMRLAFDNV AGASDLKLNS GMYQNASGES 
FSITKFNYFV SNIRLRKDDG SEFVVPQDSS YFLIQEDKPA SQTIALSNIP AGNYTGITFV
VGVDSARSMA DISKRTGVLD PALNNGMYWD WNSGYIFMKI EGTSTVAPAA QNNAFFYHIG
GFGRANVKIN NIRTVSLPFT GTVAHVESGS TPTIGLKTDV LKIFNGPTKL SIAQNPSVMF
DLYSTNIADN YAQMFSYDKI LTNQ