Gene Slin_3483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3483 
Symbol 
ID8727236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4214614 
End bp4215951 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content52% 
IMG OID 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003388290 
Protein GI284038360 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCAA ACATACCGCA AACCGATCGC AAGCGTATTG TTATTGTTGG TGCTGGCTTT 
GGCGGCCTGA AACTGGCCCG CTACCTGTCG CGCCGGAAAG AGTTTCAGGT GGTCTTACTG
AACCGGCAGA ACTACCATGA GTTCCAGCCA CTTTACTACC AGGTGGCAAC CGCCGGTCTG
GAAGCTAACT CTATTCTGTT CCCGCTACGG GCGGTGTTTG GCGATTGTAA GAACGTGCAT
ATCCGGGTGA CAAACGTTAC GGGTGTTCGA CCGGCCGATA AAGCTGTGGA TACCGAGCTA
GGCCCCGTTA CGTACGATTA TCTTGTGATG GCCACCGGTG CCGATACCAA TTTTTTCAAC
CAGCAGAACA TTATCGAGAA AGCCCTGCCC ATGAAGTCGG TAGCCGAAGC CATTGCCCTG
CGTAACCGGA TGCTGCAAAA CTTCGAAGAT GCCCTGAGCG TAGAAACCCT CGATGAGCGG
GAAGGGCTAA TGGATGTGGT GGTGGTAGGG GGCGGGCCAA CGGGCGTTGA ACTGTGCGGA
ACACTCGCAG AGATGCGCAA AACGGTACTG CCAAGTGATT ATCCCGAACT GGATTTCAAG
ATGATGGATA TATTCCTCAT CGAGTCGGGG GGGGAGTTGC TGGGGCCAAT GTCAGTACAG
TCGCAGCAGC ATTCGCTCGA TTATTTACAG AAGCTGGGAG TTAACGTCCG GCTCAACACG
CGGGTAAAGG ATTTCGACGG GCGCGTGGTC ACCATGAATG ATGGCACTAC GTTGCGAACA
AATAACCTGA TCTGGGCGGC TGGCGTAAAG GCTAATCCAC TGGCCGGTTT ACCGCCCGAA
GTGCTTGGGC GCGGTGGTCG GATTCTCGTG AACCGCTACA ATCAGGTGCA GGGATTTACC
GATATTTTTG CCATTGGTGA TGTGGCACTT ATGGCGGAAG AAAAATGGCC CAACGGCCAT
CCGCAGATCG CACAGCCCGC CATTCAGCAG GGTAGGCATC TGGCGAAAAA TATGATTCGC
TGGGCTAAAA ATGAGCCTCC CGTTGAGTTT ACGTACCGCG ATTTGGGCAC TATGGCCACT
ATTGGCCGGG GCCTGGCCGT AGTCGATTTG CCTTTTTTGA AGTTTCAGGG ATTCTTTGCG
TGGATAACGT GGTTATTTGT TCATCTAATG TCGATTGTTG GTGTTAAAAA CCGACTGGCC
ATCTTTCTGA ACTGGATGTT TAACTACCTG ACGTATAATA ACTCGTTGCG ACTTATCATT
CGTCAGAAGA TGCCTAAAGG CAATATGGCT GCCATGCAGG AAAAGCTATC CGATCAGATG
GAGGTCAGTA AAACATAA
 
Protein sequence
MNPNIPQTDR KRIVIVGAGF GGLKLARYLS RRKEFQVVLL NRQNYHEFQP LYYQVATAGL 
EANSILFPLR AVFGDCKNVH IRVTNVTGVR PADKAVDTEL GPVTYDYLVM ATGADTNFFN
QQNIIEKALP MKSVAEAIAL RNRMLQNFED ALSVETLDER EGLMDVVVVG GGPTGVELCG
TLAEMRKTVL PSDYPELDFK MMDIFLIESG GELLGPMSVQ SQQHSLDYLQ KLGVNVRLNT
RVKDFDGRVV TMNDGTTLRT NNLIWAAGVK ANPLAGLPPE VLGRGGRILV NRYNQVQGFT
DIFAIGDVAL MAEEKWPNGH PQIAQPAIQQ GRHLAKNMIR WAKNEPPVEF TYRDLGTMAT
IGRGLAVVDL PFLKFQGFFA WITWLFVHLM SIVGVKNRLA IFLNWMFNYL TYNNSLRLII
RQKMPKGNMA AMQEKLSDQM EVSKT