| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3473 |
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| Symbol | |
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| ID | 8727226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 4205594 |
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| End bp | 4206631 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_003388280 |
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| Protein GI | 284038350 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000213931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACCG TAACCATTGC CCCACTCGCC GAAAGCCTGC CTGCTTTCCT TGAATCTTAC
GATTTTTCAG CCATTGCCGT TATTGCTGAT AACCATACGT TTCGGTTTTG TTATCCCGAA
CTGAAAGCCT TTTTGCCTAA ACACACCCTT GTCCGGATCA AATCGGGAGA GGAGCAGAAG
CACATCGCTA CCTGCGAAAT GATCTGGGAT GCCCTCACGC GGGCGAATTT CGACCGTCAT
GCGCTGGTGC TCAACCTCGG TGGGGGCGTC ATTGGTGATA TGGGTGGTTT TTGCGCGGCT
ACTTACAAGC GCGGTATTGC CTTCGCGCAG CTGCCCACTA CCTTACTTTC GCAGGTAGAT
GCCAGTGTAG GCGGTAAACT CGGGATTGAT TTCCGGGGCT TCAAGAATCA CATTGGGGTA
TTTCAACAAC CTAATACGGT ACTGATTGAC CCAACGTTTC TGTCTACGCT GCCTGAGCGT
GAACTCCGGT CAGGGTTTGC CGAAGTCATT AAGCATTGTC TCATTGCTGA TGCTGCGATG
TGGGACGAAA TTCGTCGGCG CGACCTCGAC GAGCAGGACT GGGCGGCACT GGTGGCTCAT
TCCGTAGCGG TAAAACGACG CGTCGTTGAG CAGGATCCTA CCGAAAAGGG ACTACGGAAG
ATTCTGAACT TTGGCCATAC GCTGGGCCAT GCGGTAGAAA CGTATTTCCT GACGCAGCCC
CGGAAACGGC TCCTGCATGG TGAAGCCATT GCGATGGGTA TGATTGCCGA AGCTTACATT
GCCTATCAGA AAAAAATGAT CGATGAATCG CTGCTCACGC AAATCGAGGA ATACATATTT
GCCGTATATG GTAATGTGCG GTTGTCGGAC GAAGATACCG AACCGATTCT GGCCCTGACC
CTGCAGGATA AGAAAAATCG GGGGCGTGAA GTACGAATGT CGCTACTGGA TGGAGCCGGG
AGTTGTGCCT TCGATATTCT GGTATCAAAC ACCGAGATGC GGAAGGCAAT CGAGTTCTAC
CGAGGCCTAA ATAAATAA
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| Protein sequence | MSTVTIAPLA ESLPAFLESY DFSAIAVIAD NHTFRFCYPE LKAFLPKHTL VRIKSGEEQK
HIATCEMIWD ALTRANFDRH ALVLNLGGGV IGDMGGFCAA TYKRGIAFAQ LPTTLLSQVD
ASVGGKLGID FRGFKNHIGV FQQPNTVLID PTFLSTLPER ELRSGFAEVI KHCLIADAAM
WDEIRRRDLD EQDWAALVAH SVAVKRRVVE QDPTEKGLRK ILNFGHTLGH AVETYFLTQP
RKRLLHGEAI AMGMIAEAYI AYQKKMIDES LLTQIEEYIF AVYGNVRLSD EDTEPILALT
LQDKKNRGRE VRMSLLDGAG SCAFDILVSN TEMRKAIEFY RGLNK
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