Gene Slin_3457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3457 
Symbol 
ID8727210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4189462 
End bp4190754 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content52% 
IMG OID 
Productpeptidase M24 
Protein accessionYP_003388264 
Protein GI284038334 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTATT TACCAATTGA CAACCAGCTT TTCGTTCAAA ATCGTCAGCG GCTTGCACCC 
TTATTAAAAT CTAAATCGCT GGTCGTTGTG AACGCCAACG ACATTATGCC AACCAATGCC
GATGGCACGA TGGTTTTCCG GCAAAACAAC GATCTGTTTT ACCTCACCGG TGTCGATCAG
GAAGAAACGC GCCTGGTTCT TTTTCCGGAG CACCCCGATC CGAAATTTCG CGAGGTATTA
TTCCTTCGGG AAACGAGCGA ACTCATCGAA ATCTGGGAAG GGCATAAACT AACGAAAGCC
GAAGCCGAGC AGGTAACGGG CATACCGCAA AAACAGATTT ACTGGACGCA CCAGTTCGAG
CAGATTTTTG GTCAGATGGT TTTCGAAGCG GAGTTTATCT ACCTCAATAC CAACGAACAT
ACCCGGGCCG GAGTGGAAGT TCAAACGCGT GACGCCCGGT ACATCGATGC GTTCCGGCAG
AAATATCCGC TGCATCATCT GGAGCGGCTG GCTCCGCTCA TGCATTACCT CCGGGCCATT
AAACAGCCGC AGGAATTACC CCTCATCCAA ACTGCTATCG ACATTACGGA CAAGATGTTC
CGGCGGCTGC TGGGCTTTAT AAAACCGGGA GTGTGGGAGT ATGAAATCGA AGCCGAAATG
ATGCACGAAT TCCTGCGTAA CCGGTCGCGG GGAGCGGCTT ATACGCCCAT CATTGCATCG
GGTGCCAACG CCTGTGTGCT TCATTACATC GACAACAGCC AGCAATGTCA GGATGGCGAC
GTGATCCTGC TCGATATTGG GGCTGAGTAC GCCAACTACA ACGCCGACAT GACCCGTTCG
ATACCCGTTA ACGGCCGCTT TACGGCTCGC CAGCGGGCGG TCTATGATGC GGTCCTGCGT
GTGATGAAGG AAGCTACCCA AATGCTTCGC CCCGGTAACC TTTGGGATGA ATATCACCGC
GAGGTAGGCA AGGTAATGGA ATCGGAATTG ATTGGTCTGG GCTTACTGGA CCGAACCGAG
GTAGCGAATC AGGACCCGGA TGCTCCTTTG TACAAAAAGT ATTTCATGCA TGGCACCTCC
CACTTCCTGG GCCTCGATGT CCACGATGTA GGCAACAAAT ACCGGAGAAT GGAACCCGGT
ATGGTGTTCA CTGTTGAACC GGGCATCTAC ATACGGGAAG AAAAGCTCGG TATTCGCCTT
GAGAACAACG TACTCATCAC CGAATCGGGA AACATTGACC TGATGGCCAA TATACCCCTC
GAAGCGGACG AAATTGAGGA AATGATGAAC TAG
 
Protein sequence
MRYLPIDNQL FVQNRQRLAP LLKSKSLVVV NANDIMPTNA DGTMVFRQNN DLFYLTGVDQ 
EETRLVLFPE HPDPKFREVL FLRETSELIE IWEGHKLTKA EAEQVTGIPQ KQIYWTHQFE
QIFGQMVFEA EFIYLNTNEH TRAGVEVQTR DARYIDAFRQ KYPLHHLERL APLMHYLRAI
KQPQELPLIQ TAIDITDKMF RRLLGFIKPG VWEYEIEAEM MHEFLRNRSR GAAYTPIIAS
GANACVLHYI DNSQQCQDGD VILLDIGAEY ANYNADMTRS IPVNGRFTAR QRAVYDAVLR
VMKEATQMLR PGNLWDEYHR EVGKVMESEL IGLGLLDRTE VANQDPDAPL YKKYFMHGTS
HFLGLDVHDV GNKYRRMEPG MVFTVEPGIY IREEKLGIRL ENNVLITESG NIDLMANIPL
EADEIEEMMN