Gene Slin_3456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3456 
Symbol 
ID8727209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4187776 
End bp4189323 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content54% 
IMG OID 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_003388263 
Protein GI284038333 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTTC GACTTTCTGT GTTTTTATGC CTGACTGCGC TTTTTGTGCA GGGGCAAACG 
CGCCCCGCCG GGCCTGAGGT AGCCAAGTAC TGGCTGCTGC TGACCGACAA AGAGCCGGAT
GCCTTACCCG CCTTGTCGCC AACGGCAATT GCGCAGCGCA AAACACAGAA TCTGCCGCTG
GACGAAACCG ATCAGCCCGT ATCGGCCAGC TACCTGGCTC TGCTAAAACA GGCAGGTGTA
CAACCCATTT GTCAATCACG CTGGCTGAAC GCCGTGTCTG TCCGGCTAAC CCCCCAGCAA
TACGCACAGG TGGTGAAACT CCCCTTCGTA AAAGGGGTGC AGGCTATTGA TCCGGCGATT
GTTATTGCCT CAACCAGGCT ACCGGCCAAC CCCCAACTGG CGCCGGTGAT GTCGCAGATT
CAGGCCCCTG ATTTCACAAA AGCGGGTCTG ACGGGGCGGT TCGTAAATAT CGGCGTTATC
GACGCTGGTT TTTTTGGTGC CGACTCTGCC AATGCGCTCC GGCATGTGTT CGCTCGTCAG
GGGGTGAAAC GGGTCCGGGA CTATGTCAAC GAAAAGAAGA CGCATAATGA GTTGTTTCGC
ACGCTGGAAT CCAATGCCGA TTTTCATGGG ACAGAAGTGC TGGCGGCTAT AGCGGGCAGC
GACCCGGTCG AAAATATTCA GTTCGGGCTG GCTACCGATG CAACCTTTTA CCTGGCACGT
ACGGATCAGG GAAACCGGGA GTATCGGGGT GAGGAAGACA ACTGGGTGGC CGCTATGGAA
TGGATGGACA GTCTCGGCGT TCGGCTCATA AATACCTCGC TTGGGTATGC CAAAGGCATG
AGTAACCCCA AAGACAATTA CGAGCCTGGC CAGATGGATG GACATACCAG CCTGATTAGT
AAAGCCGCTC AGATTGCCGC CGATAAAAAA GGAATGCTGA TCATTGTATC GGCAGGTAAT
GAAGGAGAAG ACCGAACATG GCGTATCATC AGCACCCCGG CCGACGCACA GGGGGTGCTG
GCTATTGGTG CCACGAACTC CCGTCTCTGG AACCGCATTG GATACAGCAG TATCGGACCT
GAGAGTCTGG CGTACCTGAA ACCTAATGTG GCCTGTTTTT CGCTATACGG CACGTCGTTA
TCCGCACCGG TCATTACGGG TTTTGCCGCT TGTATCATGC AGGCAAACCC TAAACTCACG
AACAAAGAGG TAATGTCGAT TATCGAAAAA TCGGCCCATC TGTATCCTTA CGGAAATAAT
TATGTTGGCT ATGGCGTTCC GCAGGCATCG CGGGCGCTGG CGCTGCTTCG TAGTCAGGAA
CTTCCTGTTG TTGCGCGGTC AGTTAAAGGG ACCGGCAAAA GCATGACCCT GCCCATTGCT
ACCAGCGACC TGGCCGTTTC TGTTTTCCAC AAGAAAGATG CTACCCATGT GTTGCAGCAG
GAGGCTGCCA AAGTGAATGC GGGCAAGCTT GTCGTGCGCC GGTCGGCAGA TGAAAAACAA
ACAACCGTAG ACCTCAAAAC CGAAGTGATT GAAATCATCT GGGAGTAA
 
Protein sequence
MTFRLSVFLC LTALFVQGQT RPAGPEVAKY WLLLTDKEPD ALPALSPTAI AQRKTQNLPL 
DETDQPVSAS YLALLKQAGV QPICQSRWLN AVSVRLTPQQ YAQVVKLPFV KGVQAIDPAI
VIASTRLPAN PQLAPVMSQI QAPDFTKAGL TGRFVNIGVI DAGFFGADSA NALRHVFARQ
GVKRVRDYVN EKKTHNELFR TLESNADFHG TEVLAAIAGS DPVENIQFGL ATDATFYLAR
TDQGNREYRG EEDNWVAAME WMDSLGVRLI NTSLGYAKGM SNPKDNYEPG QMDGHTSLIS
KAAQIAADKK GMLIIVSAGN EGEDRTWRII STPADAQGVL AIGATNSRLW NRIGYSSIGP
ESLAYLKPNV ACFSLYGTSL SAPVITGFAA CIMQANPKLT NKEVMSIIEK SAHLYPYGNN
YVGYGVPQAS RALALLRSQE LPVVARSVKG TGKSMTLPIA TSDLAVSVFH KKDATHVLQQ
EAAKVNAGKL VVRRSADEKQ TTVDLKTEVI EIIWE