Gene Slin_3439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3439 
Symbol 
ID8727192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4166909 
End bp4167685 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content50% 
IMG OID 
Productprotein of unknown function DUF306 Meta and HslJ 
Protein accessionYP_003388246 
Protein GI284038316 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACTA CTTTGCTTGG TCTGTTACTG CTGACCGCTG CCTGCCGCCG TCCATCGACC 
CAATTTGCTG CCATGCTCAC CCCTGCCAAT CAGGTGTCTA TTACAGATTA CAGCCAACAC
CTGAAAGCGG GCGATGAGGT TATTGCTATG GGCAACGACC CGGCATGGTC GTTGACACTG
AACCCATCGA AAAATACGCT TCATTTTAAA GCCCTTGATG GTGATAGCCT GACGACCACC
ATCCCCGAAC GCCAGACGGA CCCGGACGGC GTTTTCCGGT ACAATACCGG CGTAGAATCA
GACCGTATAA CTAGTTTATT CAGACCCGAC AGCTGTGTCA ATAAATTATC GGGACAGCGA
TTGGATTATC GCGTAGAAGT AAATTTCCGG GGTAAAAACT ACGTGGGTTG CGGTGCGTCC
TTACAGCAGC TCGCTTTGCT GAATGATATA TGGGTACTTA CCGATTTTCG GGGAACGGCA
ATAACCGCCA ATGGGCCCCG TAACGAAGCG CCCCGCCTTG AGATTTCGCT GGCCGAAAAT
CGGGTAACAG GCACAACCGG TTGCAACCGG CTCAGTGGCT CAATAAAGGC CGACACCCGG
CAACTTTTAG TTGGCCCGTT AGTGACCATA AAAATGGCTT GTCAGGATGC TGCGAACCAG
TTGGAAAGTA ATCTTCTGAA TGAACTTGGC AATCCACTTA CCTACAGGAT AGGCAATGGC
AAATTGACGT TGCTTCGAAA TAATAAGCCA GTGATGACCT TCAAAAAGGT AGATTAA
 
Protein sequence
MRTTLLGLLL LTAACRRPST QFAAMLTPAN QVSITDYSQH LKAGDEVIAM GNDPAWSLTL 
NPSKNTLHFK ALDGDSLTTT IPERQTDPDG VFRYNTGVES DRITSLFRPD SCVNKLSGQR
LDYRVEVNFR GKNYVGCGAS LQQLALLNDI WVLTDFRGTA ITANGPRNEA PRLEISLAEN
RVTGTTGCNR LSGSIKADTR QLLVGPLVTI KMACQDAANQ LESNLLNELG NPLTYRIGNG
KLTLLRNNKP VMTFKKVD