Gene Slin_3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3438 
Symbol 
ID8727191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4165849 
End bp4166763 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content48% 
IMG OID 
ProductLate embryogenesis abundant protein 2 
Protein accessionYP_003388245 
Protein GI284038315 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.370192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG GATGGTTGAT TGCATTGGGG CTATTACTGA TTGGCTGTAT TGGTGCCTAT 
GTCTGGTATC GAAATGTAAA AGATGAACGT ACGGCAGAAG GAAAGCCCTA TGACGATACC
CTGAAACCCC GACTGGAAAT GACTCGTATG GCCATCACCG ATATCAGCGA AGACGTTATT
TCTATGAATC TGTACATGCT GATCGATAAC CCCCTGCCCG TTGGTTTTAA ATCACCCAGC
CTGGATTACA CGTTTTACAT CGCCAACACG CCCGTAATGG TCGACGCGTA CAAGAAGCCA
ATCGAAGTGA AGTCCGGCGA CAGTACGCTG GTTGTGCTCC CCGCCAGGCT GGCCTACAAA
AAGCTGGCAA GCGTACTGAA GACCCTTGAT CGAAAAGACA TCGATAGCAC TAATTACAAG
ATGCGGGCGA AATTCGCGCT CGACATACCC ATTCTGGGGC AGAAAACCTT TGAGACTACA
GTTGACAAGC GAATGCCTAC GTTTTACCTG CCAGAGGTCA AAATTGATGA CATCGACTTT
GGCAAACTGG GACTAAAACG AACCGATGTA GCCGCAAAAG TGAGTATCAC TAACAAGAAC
AAGATGCCGT TCAGCATAAC CGACGCGCAC TATACGGTTT TCATTGACGG AAAAGAGATT
GCCGACGGTG AACAAACCGA GCCAATTCGG ATCAAGGCGC AGGCAACGAC GCCCGTTGTA
TTTCCGGTAA CGGCCCGGCC CGGTAAAACG CTGAGTGTAT TGCCAAAGAT GCTGTTCGAC
AAAAAAGACA CGCCCTATCG GGTTAACTTC CGGTGTAAAC TCATCGACAA GGAAAACAAC
TCGTCGTTTG CCAACAGCAA ATTCGTATCG ACGATTACCG GGACGCTGGA CGATTTTAAG
AAGCTGAAGA AGTGA
 
Protein sequence
MKKGWLIALG LLLIGCIGAY VWYRNVKDER TAEGKPYDDT LKPRLEMTRM AITDISEDVI 
SMNLYMLIDN PLPVGFKSPS LDYTFYIANT PVMVDAYKKP IEVKSGDSTL VVLPARLAYK
KLASVLKTLD RKDIDSTNYK MRAKFALDIP ILGQKTFETT VDKRMPTFYL PEVKIDDIDF
GKLGLKRTDV AAKVSITNKN KMPFSITDAH YTVFIDGKEI ADGEQTEPIR IKAQATTPVV
FPVTARPGKT LSVLPKMLFD KKDTPYRVNF RCKLIDKENN SSFANSKFVS TITGTLDDFK
KLKK