| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3430 |
|---|
| Symbol | |
|---|
| ID | 8727183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 4158365 |
|---|
| End bp | 4159708 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | |
|---|
| Product | peptidase M56 BlaR1 |
|---|
| Protein accession | YP_003388237 |
|---|
| Protein GI | 284038307 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCTTT ACCTCCTCAA ATCCAGCCTT TGCCTGTTGG TACTTTTTGG TTTTTACAAG
CTGTTGCTGG AAAACGAAAA AATACACCGG TTTAATCGGT TCTACCTTTT GTTCAGCCTT
GTATTTTCGT TCACCGTTCC TTTGATAACG GTCAATGTTC AGTCTGAGCT TATTTCTGTT
TTTGGCCAAC AGCCTATACC ACAAGTCGAT AACCGTCTGA TTGACCGACT TGAACCAGAT
AAGCTGCCGA TTCAATCTGC ATACGATTTT TCGGATATAG CTGGCTTTCT GTACTGGCTT
ATTACTTCTG CCCTGCTTGT CCGGTTTTTT CGAAATAGTT TCTCCCTGAT TCGACGCATC
AGTCAACACA GGCGGGTTCA TTACCAGGGT GCTACCCTTG TTCTGTTGCC TGACAATTGC
CTGCCCCACA CGTTTTTACA TTACCTGTTT ATCAACCAGT CAGCCTACGA ATCGCGGGCA
ATTGAGCCGG AATTGTTTAC CCACGAACTA GCCCATATCC GGCAGAGGCA TACCTACGAT
ATTCTTTTTA TTGAGTTGCT TTCCTGCTTT TATTGGTTCA ACCCCTTGCT TTTCCTGATC
AAACGTGCCA TCCGGCTCAA CCATGAGTTT CTGGCCGATG CAGCGGTTAT TGACCAGCAC
CAGCACGTCA TTGAGTATCA GTGCTTGCTA TTAAGCAAGT TAACCCTGGC TACACCCGCT
TCTTTAACCA GTCAACTAAC GTTTCACGCA ACAAAACAAC GATTTCTTAT GATGACCAAA
CGCACATCCA AAACACGGAT TTTGATAACA GGGACCGTAG CACTGAGCCT GTTTGCGCTA
CTTACAGTTG TTTTCAGCAC TAAATTGGTT GCTCAAGTCC CTACAACTCC TTCACAAAAG
GCGCAAACCA GAATAGTGCA GAAGCCCCTT CCGGTGAATT CAAGCAAATT GGAAGAGCAA
TACAAAGATA AGCTAGTGAT AAGCTGGTCC CGAGACCGGC GGAAGTTTTC TGATCTGTCT
GAAGAAGAGA AGAAGAACGT TGTTTTAGTA GCACCTTTTC CTCCAAAAAC ACCTACGGAC
GCCCAATTTT CGGACTGGAA GAACCCTAAA TTATTTGGTA TCTGGATCGA CGGCAAGCGG
GTGAAGAATG AGGTATTGGA TACTTACAAA CCCACAGATA TTACCTCATT TTCGGGCAGC
TTTGTGCATA AGAACGCCCG TCAGCCCGAA GGCTATTTAT ACCAGATGGA CCTAATGACC
CATTCAGCCT ACGAACGGTA TCTAAAAGAA AGAGAAGAGA ATCCACTTTT AATTGTGATG
AAGCCACGAC CAAAGCGGCA GTAG
|
|---|
| Protein sequence | MMLYLLKSSL CLLVLFGFYK LLLENEKIHR FNRFYLLFSL VFSFTVPLIT VNVQSELISV
FGQQPIPQVD NRLIDRLEPD KLPIQSAYDF SDIAGFLYWL ITSALLVRFF RNSFSLIRRI
SQHRRVHYQG ATLVLLPDNC LPHTFLHYLF INQSAYESRA IEPELFTHEL AHIRQRHTYD
ILFIELLSCF YWFNPLLFLI KRAIRLNHEF LADAAVIDQH QHVIEYQCLL LSKLTLATPA
SLTSQLTFHA TKQRFLMMTK RTSKTRILIT GTVALSLFAL LTVVFSTKLV AQVPTTPSQK
AQTRIVQKPL PVNSSKLEEQ YKDKLVISWS RDRRKFSDLS EEEKKNVVLV APFPPKTPTD
AQFSDWKNPK LFGIWIDGKR VKNEVLDTYK PTDITSFSGS FVHKNARQPE GYLYQMDLMT
HSAYERYLKE REENPLLIVM KPRPKRQ
|
|---|
| |