Gene Slin_3429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3429 
Symbol 
ID8727182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4157997 
End bp4158368 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content45% 
IMG OID 
Producttranscriptional repressor, CopY family 
Protein accessionYP_003388236 
Protein GI284038306 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.819538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAT CAGCCGCCGA AGAAACCCTC ATGCAACACC TGTGGAAACG GGAAAAAGCC 
TTCATGAAAG ACTTGCTTGA TGCCTACGAC GACCCGAAAC CTGCCGTCAC TACGGTAGCT
ACATTACTCA AGCGGGTCAT TGATAAAGGG TTTATCAGCT ATCGGGAATA TGGCAATTCG
CGGGAGTATT ATCCGCTGAT TACGCGAAAC GACTATTTCT CGACACATGT CAACGGACTC
ATCAGGAATT TTTTCAATAA CTCTGCCGCC CAGTTTGCTT CGTTTTTTAC CACCGAAACA
CAGTTGTCAG CGTCTGAACT GGAAGCGCTA AAAGACATAA TCGATCAGGA AATTCAAAAG
CGGAAATCAT GA
 
Protein sequence
MKLSAAEETL MQHLWKREKA FMKDLLDAYD DPKPAVTTVA TLLKRVIDKG FISYREYGNS 
REYYPLITRN DYFSTHVNGL IRNFFNNSAA QFASFFTTET QLSASELEAL KDIIDQEIQK
RKS