| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3428 |
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| Symbol | |
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| ID | 8727181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 4155655 |
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| End bp | 4157736 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_003388235 |
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| Protein GI | 284038305 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.435354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGTC ATTTATGGGC TTTGTTTGGC TTTCTTGTGA TCGAGATAAT CACCTCACAT
GTTGCGCAGG CACAGCGTCA ATTAATCGAC AGTCTGAAAG CAACGTTGCA TGACAGGCTG
CCTGATACCA CCCGGACAAA CACGTACTAT GATATTGCGA ATGCCTTTTT CAAAGAAAGT
CAGCTCGATT CGGCCAATCA TTATCTGAAG CCAATGCTGG CGCTCTCCAG GCGCACGAAC
AACGTCGTTG CCTTAGGCGA TTATCATTTA TTGACGGCCA CCATCCGATT ACATCAGGGC
CTGTTCGACG AATCTTTGTT AAGTGCGCAG GCGGCCATAA ACTGTTTCAC CCGCAGCCAC
AAGCCCGGTT CTGTTGCCCG GGTATACCAT ACCATGGGAC TGCTGTATAA AACCATGGGC
GAAAATCAGC GAGTGCGCAG CCACCTCGAA AAAGGTATAT ACTACATGCA GCAGGCCATT
ATTATCAACC AAACCATCAA GGCTAACCGC AATCTGGCCG ATAATTATGT GAACCTTGGT
ATTATTTATG AAGACCTCAA TAAGTTTGAA CAAGGCAGGG AATGCTTTCT CAAAGCGATA
GCCATCAATG ATGCCATTCA TTCTAAGCCG GAGGCTTACC GGGTCATTTA CAACAACCTG
GGTAAAAATT CGAATGTACA GGGCCGGTAT GAAGAAGCTA TCGGATATCT CAATAAGGCG
CTGGCTATTA ATCTGGAACT GAACAGAACC ACCAGTCTGG TACACAATTA CCGAAATTTA
TCGACTGCCT ATCAGGCATT AAAGAAAAAT GAACAGGCTG AGTACTATGG CGAAAAGGCC
ATAAAGCTGG TCGAACGGAG TAAAGATGCC CCTTTAACCC GGTCGGTATA CAAGATGATG
TCACAGATGT ATGCCAGTAC GGGAAAATAC GATAAAGCCT ACCATTATGC CGTGCAGAAC
AAGCGAATAG AAGATTCGTT AATGACGCTC GAAAAGACCC GAACGGTGGC AAGACTGGAA
GAGCAGTTTG CGGTTAAGAA AGCCAATGAT CTGGCTACAA TCCAGGCTAA CCTGGCCCTT
GCCAAAGCGC GGGAAATTGC CCGGATAGAA TCGATAAAGG CTAAAGAAAT AGCGGCTATT
CAGGCAGAGA AAGACCGCAG AATTGCACAG ATTCAGGCGG CTGCTGAGGT CGAAAAAACG
CGGGCCGTTG CCGAAGTGCA GGCAAAATAC GAGACCCAAA GGCGGATAAA TCAAATTGCG
GTACTCGATC AGGAGAATCA TCAAACTACC CGTCAAATGC AGTACATGGC CGGCGGACTG
GGTTTGCTTT TTCTCCTGCT CAGTATTCTG GTTGGCCAGT ATTGGGCAAT TCGCCGGGCG
AACCTGCGCT TATCTGCCCA GAACGAAATC ATTACCAGCA ACAGTCAGCA ACTCATCAGC
CAGTCGGATC AGCTTCGTAC GCTGATGAAA GAATTACACC ACCGGGTAAA AAATAATCTG
GCCATCGTAT CGAGCCTGCT TACCTTACAG GCCAATGGGC TGACCGATGA AAAAGCAATT
CAGGCGCTAC GAAAAGGCCA GCAGCGGGTG CAGGCTATGT CGTTGATACA TCAGCGGTTA
TACCAGTCGG ACCGGGTGAC CATCGTTAAT ATACGGGATT ATCTGACCGA TCTGGCCGAA
AGTCTGATGC AGGCGTATGG GTATGAGTCG TCCAACTTCG ACCTACAGGT AGATGTTGTT
CTACAGGAGT TGGATGTGGA TGTTGCGATG CCATTGGGAT TGATTGTCAA CGAACTAATC
ACCAACTCCT TTAAATATGC TTTTGTCCAT CAGGAGCGTC CTTTGCTGCG GATCAAGCTG
GATTATACGG ATGGCTCTCT ACAGCCGGGT ATCACGCTGG AAGTGCAGGA TAATGGCCCT
GGTATAAAAG CGGACGACTG GCAGAAATCG GGTAGCCGAA AATCGTTTGG AAGGCGTCTG
GTTACCTCGC TTGCCGAACA ACTGGAAGGC AACTTTGAAC TGGTATCTCA AAACGGAACC
TTGTTCCGGT TACACATTCC GCAAACCCGA CTGGCAGCCT GA
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| Protein sequence | MKSHLWALFG FLVIEIITSH VAQAQRQLID SLKATLHDRL PDTTRTNTYY DIANAFFKES
QLDSANHYLK PMLALSRRTN NVVALGDYHL LTATIRLHQG LFDESLLSAQ AAINCFTRSH
KPGSVARVYH TMGLLYKTMG ENQRVRSHLE KGIYYMQQAI IINQTIKANR NLADNYVNLG
IIYEDLNKFE QGRECFLKAI AINDAIHSKP EAYRVIYNNL GKNSNVQGRY EEAIGYLNKA
LAINLELNRT TSLVHNYRNL STAYQALKKN EQAEYYGEKA IKLVERSKDA PLTRSVYKMM
SQMYASTGKY DKAYHYAVQN KRIEDSLMTL EKTRTVARLE EQFAVKKAND LATIQANLAL
AKAREIARIE SIKAKEIAAI QAEKDRRIAQ IQAAAEVEKT RAVAEVQAKY ETQRRINQIA
VLDQENHQTT RQMQYMAGGL GLLFLLLSIL VGQYWAIRRA NLRLSAQNEI ITSNSQQLIS
QSDQLRTLMK ELHHRVKNNL AIVSSLLTLQ ANGLTDEKAI QALRKGQQRV QAMSLIHQRL
YQSDRVTIVN IRDYLTDLAE SLMQAYGYES SNFDLQVDVV LQELDVDVAM PLGLIVNELI
TNSFKYAFVH QERPLLRIKL DYTDGSLQPG ITLEVQDNGP GIKADDWQKS GSRKSFGRRL
VTSLAEQLEG NFELVSQNGT LFRLHIPQTR LAA
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