Gene Slin_3422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3422 
Symbol 
ID8727175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4149550 
End bp4150212 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content51% 
IMG OID 
Productpeptide methionine sulfoxide reductase 
Protein accessionYP_003388229 
Protein GI284038299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGAA TTCACGTATT GGCGTTCAGT CTGCTGTTGC TGGCAGGGTG TGCGCAGGGC 
CAATCGAAAG ACTACGCACC CGCTAAACTT CCTGCCCTGA AACCGGGTGA AGCAGTGGCA
ACCTTCGCAG GCGGCTGCTT CTGGGCGCTT GAAGAAGGGA TGAACCAGTT GAAAGGTGTT
CGGGAAGTAA TCTCAGGTTA TGCGGGTGGG CACGTTAAAA ACCCGACCTA CGAACAGGTA
GGCACTGATG AAACGGGGCA TGCAGAATCT GTTCAGGTGT ACTATGATCC GAAAGTGATC
AGCTACCCGC AATTACTCGA TGCTTTTTTT GCCGGTCATG ACCCCACCAC ACTGAACCGT
CAGGGGCCCG ACGTAGGCCG CGATTATCGA TCGGTGGCTT TTTACCGGAC ACCTGCCGAA
AAAGCCGAAA TCCTGGCGGC TATTAAACGA ACCAACGACT CGAAGCATTA CGCGAATCCC
GTTGTAACGG AAGTAACGCC TATCACGGAT TTTTATCCGG CCGAAAATTA TCACCAGAAT
TACTTTGCGC TTCACCCCGA CCAGCCTTAC ATCCAGCGCG TATCTTTACC AAAAGTTGAG
AAACTCCGGA AAGCAATGGC CGGTCATCTG AAAAACAATA CGTCGTTAAC GATGAATAAC
TAG
 
Protein sequence
MKGIHVLAFS LLLLAGCAQG QSKDYAPAKL PALKPGEAVA TFAGGCFWAL EEGMNQLKGV 
REVISGYAGG HVKNPTYEQV GTDETGHAES VQVYYDPKVI SYPQLLDAFF AGHDPTTLNR
QGPDVGRDYR SVAFYRTPAE KAEILAAIKR TNDSKHYANP VVTEVTPITD FYPAENYHQN
YFALHPDQPY IQRVSLPKVE KLRKAMAGHL KNNTSLTMNN