Gene Slin_3417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3417 
Symbol 
ID8727170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4137687 
End bp4138826 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content52% 
IMG OID 
Productesterase 
Protein accessionYP_003388224 
Protein GI284038294 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.745885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGTC TGACTAGTTG CTTGCTTATC TTACTTATTG TCGTTGGTGC AACGGCTCCT 
GAGCCGGGCT TACGTTTTAC CCGTCAGTTC GTGGCTGCTG AAAGCTACGA GTCAGTAGGG
GTATTTGATG TTGATAATGA CGATACACTT GATATTGTAT CCGGCGATTT CTGGTACAAA
GGGCCGGGTT TCTGGAATAG ATACCTCATT GGAAATGAGC CCCGGAAAGA TCAGTACTAT
GATGATTTCT CGACTATCCC GCTTGATGTC AATAGTGACG GCCGACTGGA CTTCCTGACC
GGCGGCTGGT TCGACCAGAC GCTGCGGTGG GTGGAGAACC CCGGCAAAAA AAATGCGGTC
TGGCCATTGC ATGAGATCGG TAAAGTAGGC AATGTGGAAA CGACCCGTGC CTGGGATGTG
GACGGCGATG GCATTGTTGA CATTGTGCCC AACAATCCCA ACCACCCGCT AAAGTATATT
AAACTGGTGA GTTCCGGTGT CTTTAAAACG GTTACCGTAG CGCCTACACA GGGGCACGGT
TTGGGCTTTG GCGACGTGAA TGGTGACGGA CGGGGTGACC TGATTATACC GGATGGCTGG
CTCGAAGCGC CTGTCGATCG GGAGTCTGGT CTCTGGACGT TACACAAAGA GTTCTCACTT
GGTACGGCTA GTGTACCCAT CATTGTGGCC GATGTAAACG GCGATAAGCG GAACGATCTG
ATTGTAGGGC AGGGGCATAG TTATGGGCTG CACTGGTACG AACAAACCCG CGATGCTGCT
GGACAGCGTG GCTGGACAAA GCACCTGATC GACGATAAGA ATTCCCAGTA CCATTGCCTG
GAGTGGGTTG ATATTACGGG CGATGGGCGT CCCGAACTAC TAACCGGCAA ACGCTTTCGG
GCGCACAACG GCAACGACCC CGGCGAGAAG GACCCCGTCG GGCTATATTA TTTCACCTGG
GAGGCCTCGA AGAAGCAGTT TGTGAAGCAT GACATTGCCT ATGGTCCGGC AGGAGTTGGT
AAAGGCACAG GCATCTATTT CGCCGTTGCC GACCTGCACA AAACTGGCCG AAAGGATATT
GTTGTTGCCG GTAAGGACGG CCTTTTTGTA TTTTTTAACG AAGGGAGCGC GAAAAAATAG
 
Protein sequence
MLRLTSCLLI LLIVVGATAP EPGLRFTRQF VAAESYESVG VFDVDNDDTL DIVSGDFWYK 
GPGFWNRYLI GNEPRKDQYY DDFSTIPLDV NSDGRLDFLT GGWFDQTLRW VENPGKKNAV
WPLHEIGKVG NVETTRAWDV DGDGIVDIVP NNPNHPLKYI KLVSSGVFKT VTVAPTQGHG
LGFGDVNGDG RGDLIIPDGW LEAPVDRESG LWTLHKEFSL GTASVPIIVA DVNGDKRNDL
IVGQGHSYGL HWYEQTRDAA GQRGWTKHLI DDKNSQYHCL EWVDITGDGR PELLTGKRFR
AHNGNDPGEK DPVGLYYFTW EASKKQFVKH DIAYGPAGVG KGTGIYFAVA DLHKTGRKDI
VVAGKDGLFV FFNEGSAKK