Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3402 |
Symbol | |
ID | 8727155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4117043 |
End bp | 4117777 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Haloacid dehalogenase domain protein hydrolase |
Protein accession | YP_003388209 |
Protein GI | 284038279 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0865244 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCCAA TTGAATTAGT GGTATTTGAT ATGGCCGGTA CTACTGTAAC CGACCAGCAC GAGGTAGAAC GGTGTTTCGC CGAAGCTGCC GTTGAAACGG GTTTGTCGGT TTCCGACGAG CGGATTCTGG CAATGCAGGG GCTCTCCAAA CGCTATGTGT TTGAAACACT TTGGAAGGAA CAGCTCGGTG AAGATAGTCC CGTCGTTCAA TCACAGGTTG ACATTTCATA CGATGCGTTC CGTCGTATTT TGGAAAATCA CTACCTCACC AAGGGAGCTA CGCCCACCGA AGGTTGCCTG GAAACTTTTG CCTACTTACA CGAACGAGGT ATCGCTATTG CGCTCACAAC GGGATTTTAC CGGGTGGTAA CCGACATTAT TCTGGAAAAA CTCGGCTGGC TCGATGGGCT TAACGACCAA CGTATTGGTA CTCCCGATAG TCTGCTACAG ATCTCCATTG CCAGCGATGA GGTAGAACGG GGCCGCCCGT ACCCCCAAAT GATCGAGCGG GCCATGCATC TGCTGGGCGT AACGAACCCG AAAGCCGTTG TGAACATTGG CGATACACCA TCCGATTTGC TCTCGGGACG AGCCGCCGGG GTAGCGCTGA ATCTGGGCCT AACCAATGGT ACCCATACCC GCGAGCAACT GGAACAACAT CCGCACGACT TGTTGCTGGG GTCACTCCGG GAATTACCCG CCCTTCTGGA AAAGCGTGAA CTATCTTTTA CCTAA
|
Protein sequence | MQPIELVVFD MAGTTVTDQH EVERCFAEAA VETGLSVSDE RILAMQGLSK RYVFETLWKE QLGEDSPVVQ SQVDISYDAF RRILENHYLT KGATPTEGCL ETFAYLHERG IAIALTTGFY RVVTDIILEK LGWLDGLNDQ RIGTPDSLLQ ISIASDEVER GRPYPQMIER AMHLLGVTNP KAVVNIGDTP SDLLSGRAAG VALNLGLTNG THTREQLEQH PHDLLLGSLR ELPALLEKRE LSFT
|
| |