Gene Slin_3402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3402 
Symbol 
ID8727155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4117043 
End bp4117777 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content53% 
IMG OID 
ProductHaloacid dehalogenase domain protein hydrolase 
Protein accessionYP_003388209 
Protein GI284038279 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0865244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCAA TTGAATTAGT GGTATTTGAT ATGGCCGGTA CTACTGTAAC CGACCAGCAC 
GAGGTAGAAC GGTGTTTCGC CGAAGCTGCC GTTGAAACGG GTTTGTCGGT TTCCGACGAG
CGGATTCTGG CAATGCAGGG GCTCTCCAAA CGCTATGTGT TTGAAACACT TTGGAAGGAA
CAGCTCGGTG AAGATAGTCC CGTCGTTCAA TCACAGGTTG ACATTTCATA CGATGCGTTC
CGTCGTATTT TGGAAAATCA CTACCTCACC AAGGGAGCTA CGCCCACCGA AGGTTGCCTG
GAAACTTTTG CCTACTTACA CGAACGAGGT ATCGCTATTG CGCTCACAAC GGGATTTTAC
CGGGTGGTAA CCGACATTAT TCTGGAAAAA CTCGGCTGGC TCGATGGGCT TAACGACCAA
CGTATTGGTA CTCCCGATAG TCTGCTACAG ATCTCCATTG CCAGCGATGA GGTAGAACGG
GGCCGCCCGT ACCCCCAAAT GATCGAGCGG GCCATGCATC TGCTGGGCGT AACGAACCCG
AAAGCCGTTG TGAACATTGG CGATACACCA TCCGATTTGC TCTCGGGACG AGCCGCCGGG
GTAGCGCTGA ATCTGGGCCT AACCAATGGT ACCCATACCC GCGAGCAACT GGAACAACAT
CCGCACGACT TGTTGCTGGG GTCACTCCGG GAATTACCCG CCCTTCTGGA AAAGCGTGAA
CTATCTTTTA CCTAA
 
Protein sequence
MQPIELVVFD MAGTTVTDQH EVERCFAEAA VETGLSVSDE RILAMQGLSK RYVFETLWKE 
QLGEDSPVVQ SQVDISYDAF RRILENHYLT KGATPTEGCL ETFAYLHERG IAIALTTGFY
RVVTDIILEK LGWLDGLNDQ RIGTPDSLLQ ISIASDEVER GRPYPQMIER AMHLLGVTNP
KAVVNIGDTP SDLLSGRAAG VALNLGLTNG THTREQLEQH PHDLLLGSLR ELPALLEKRE
LSFT