| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3398 |
|---|
| Symbol | |
|---|
| ID | 8727151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 4109720 |
|---|
| End bp | 4110634 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | metallophosphoesterase |
|---|
| Protein accession | YP_003388205 |
|---|
| Protein GI | 284038275 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.11944 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCA GAACCCTCCT TAAATCAGCC GCTTTATTGC CGACACTGGG TGCCGAAGCC
GCGATTGCGC CCAATCTGGC CCGTAAACGC TCCGTTCGGT TTGCCTATCT GGGCGATACG
CACATTACGC CGGACGCTAA ACCCGTCGAA CGCATCGCCA AGTGTTTTCA CCATGTACAG
AATCAGGCCG ATAAACCATC GTTTATCCTG CACGGGGGCG ATGTGATCAT GGACGCGCTG
GCCGAAGACC GGCAGAAGGT ACAGCAGCAG TGGGATGCCT GGAACGGGCT CGTGAAGGCC
GATAACTCGT TACCCATCGA GTATTGTATT GGCAATCACG ACATCTGGGG CTTCGAAAAC
GCGAAGAATG ACCTGCTTTA CGGTAAAAAA TGGGCCATCG ACCAGATGAA AATTAGCGGT
CGTTACCGGA GTTTCGACCG GAATGGCTGG CATTTTATCG TCCTCGATAG TGTACAGCCC
AAACCCGACG GCAAATGGTA CACTGGCAAT ATCGACGCTG AACAAATGGA CTGGCTGAAA
GCCGACCTGG CTAAAACTAA TCCAAAAACA CCCATCCTGG TCCTGTCGCA CATTCCGATC
TTCAGCCCAA CGGGGTTTTT CAGTGATACC AATGTAAAGG ATGGAAACTG GACCATTTCG
GCGGGTACTA TTCTGGCCAA TACACCCGAC CTGCTGAAAC TTTTCTATCA ATACCCTAAT
GTAAAAGCCG CCTTAAGCGG ACACATGCAC CTGCTGGATC GGGTTGAGTA TAACGGCGTT
GCGTACCTTT GCAACGGAGC CGTTAGCGGA AACTGGTGGA AGAGCGACGT CTACCAGCAA
ACGAAAGCCG GCTACGCCCT CTTTGATTTA TACGACGACG GAAGTGTAGA ACGGACATAT
TTGTCCTATA TGTAG
|
|---|
| Protein sequence | MNRRTLLKSA ALLPTLGAEA AIAPNLARKR SVRFAYLGDT HITPDAKPVE RIAKCFHHVQ
NQADKPSFIL HGGDVIMDAL AEDRQKVQQQ WDAWNGLVKA DNSLPIEYCI GNHDIWGFEN
AKNDLLYGKK WAIDQMKISG RYRSFDRNGW HFIVLDSVQP KPDGKWYTGN IDAEQMDWLK
ADLAKTNPKT PILVLSHIPI FSPTGFFSDT NVKDGNWTIS AGTILANTPD LLKLFYQYPN
VKAALSGHMH LLDRVEYNGV AYLCNGAVSG NWWKSDVYQQ TKAGYALFDL YDDGSVERTY
LSYM
|
|---|
| |