Gene Slin_3393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3393 
Symbol 
ID8727146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4101109 
End bp4102161 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content56% 
IMG OID 
ProductAlpha-N-arabinofuranosidase 
Protein accessionYP_003388200 
Protein GI284038270 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.179766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATT ATCTGTTTAT ACTGCTGGCG CTGGTGATCG CCTGCCAGTC GGCTGACAAG 
CCAAACCCCA CGCCTACCCC ACCCGTCACG TCGGTCGACA CGGTCGGCAA GTTCCAGAAT
CCGTTGCTCA CCGCAGCTCC CGACCCCTGG GTGACGTATA AAGATGGCTT CTATTACGTG
ATGCACACCA CCGGAAACGA TCTGCGCATC TATAAAACAG CCGCCATGAG TCGTCTGGGT
TCGGCACGTC CGGTAACCGT CTGGACACCG CCCACCACCG GCCCCAACTC CCGCGACATC
TGGGCACCGG AACTCCACTT CGTCAACGGC AAATGGTACA TCTACTACGC TGCCGACAAC
AACGGCAACG ACGCGACCCA CCGCATGTTT GTGCTAGAAA ACGAATCCGC CGACCCGACA
CAGGGAACGT GGGTCGACCG GGGGCAGCTC AATTTACCCG AAAACCGATG GGCAATTGAC
GGTACACTAC TTCAGCAAAA TGGTCAGTTG TATTTCGCCT GGTCGGGTTG GCAAACGGAT
CAGGGCGGTT CACAGCACAT TTACATGGCC AAACTATCGA ATCCGTACAC CGTCGAAAGT
ACGGCTCGAA TTCGCCTGTC ATCGCCTGAT TATGCCTGGG AGAAAAACGG TTTTGGCGTG
AATGAAGGCC CCGAGTTTCT GGTGCATAAC AACAAAGTCT TTCTGATTTA TTCGGCCAGC
TTCTGCGGAA CGGATCTGTA CGCACTGGGC CAGCTCTCCG CCGATACCAG CGCAGATTTG
CTCAACCCGG CATCCTGGAC GAAATCAGCT ACGCCAGTTT TTGGTCCCAA CGGCGGCAAC
GGCACCTTTG GCGTGGGTCA CAACAGTTTT TTCACTACCC CCGACGGAAA GGAAAACTGG
CTCGTTTACC ACGCTAATGC CGCTTCAGGA CAGGGCTGTG GCAATAACCG CTCCATCCGC
ATGCAGCCTT TTACGTGGAA AGCCGACGGG TCGCCCGATT TTGGCAGTGC AGCTCCAATA
GCGCAATGGA TTAAGCGGCC TGGTGGCGAG TGA
 
Protein sequence
MKNYLFILLA LVIACQSADK PNPTPTPPVT SVDTVGKFQN PLLTAAPDPW VTYKDGFYYV 
MHTTGNDLRI YKTAAMSRLG SARPVTVWTP PTTGPNSRDI WAPELHFVNG KWYIYYAADN
NGNDATHRMF VLENESADPT QGTWVDRGQL NLPENRWAID GTLLQQNGQL YFAWSGWQTD
QGGSQHIYMA KLSNPYTVES TARIRLSSPD YAWEKNGFGV NEGPEFLVHN NKVFLIYSAS
FCGTDLYALG QLSADTSADL LNPASWTKSA TPVFGPNGGN GTFGVGHNSF FTTPDGKENW
LVYHANAASG QGCGNNRSIR MQPFTWKADG SPDFGSAAPI AQWIKRPGGE