| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3391 |
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| Symbol | |
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| ID | 8727144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 4097796 |
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| End bp | 4099319 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003388198 |
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| Protein GI | 284038268 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.540028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.274912 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA GATTCATTTC GCTAACGATA GCCGCAGCCC TGGCCTTTAC GGGTTGCCAG
CGTAGCCTCG ACATCGTGAA CCCCAACCAG GTGACAGCCG AGTCGTTCTG GAAAACGCCG
ACCGATGCGC TGGCGGGTGT CAATGCCATC TACAGCACCA CGCACCGGGG CGGTATTTCG
CGTTGGATGC CATTCTACTA CATCATCCGT TCCGATGAAG GACGCAGCCA GAGCCCAGAC
GTCGGCATTG TCAATAACAT GGACCAGTTC CTGATAACGG ACTATAACTA CGGGAATGCA
TATTCCATCT GGAATGACAA CTATATCGGT ATTAACCGAG CCAATCAGGT CATCGACAAC
GTACCCAACA TTCAGATGGA CGCTACGCTG AAGGGCCGGT ATATAGGCGA GGCCAAGTTC
CTGCGGGCCA TGTATTATTT CCACCTGGTT ACGCTTTGGG GCAACGTCCC GCTGATCCTG
CAAACCTCGG TCGTTGGTGA TAAACCTAAC TCAGCCACCA CAGCACAGGT ATGGGCGCAG
ATCGAGAAAG ACCTGACGGA TGCCGCTGCG GTACTGCCCA CAACCTACGG CAATGCCGAT
CTGGGCCGCG CTACCAAAGG GGCCGCTTAT GCCCTGCTGG CCAGAGCGCA GATGCAGCAG
CAGAAATATA CCGAAGCACT CACACCCCTT CAATGGCTGG TGGAAGGCGA TGGGAAAAGC
GTGTACTCGC TGATGCCCAA CTACCGCGAC AATTTCCTGA TCACGACCGA AAATAATAAG
GAGTCTGTGT TCGAATGGCA GTTCCAGATC AACCCGGCCG AATACACCGA CGACGACACC
GAAACGCCAA ACCAGAACTA CGGCACCTCG CTGGCGAAGT TTTTTGGCCC GCCACCGGTT
GGCTGGTCGG ATGGCGAAGC GCAACGCTGG CCTACCCGCG AATTCACCGA ACGCACAACA
ACCGGCGCCC GCGACCCGCG TCTGGAAGCG TCGTTTCTCT TCGACTCGAC CGATGTGCGT
GGCCCTGATT TCACCCAGAT TTACGGGCAG ACGTTCACCC AGCGGTACGG ACGGGATAAC
AAACGGGTAT GGTTCCGGAA GTTCCAGAAC GATCACTGGA AAACTGAAGA AGATTATCGG
TCGCCCAACA ACTGGCGATA CATTCGCTAC GCCGATGTAC TGCTGATGTA TGCCGAAGCC
CTCAACGCGA CCGGCAAAAC AACGCAGGCC TATACGTACG TCGATCAGGT GCGTCAGCGG
GCGGGACTGC CTACGCTGAC CGTTGCGAAA CCCGGACTCA CGCAGGCCCA GTTTCTGGCC
CAGCTAAAGC ACGAGCGGTT ACTGGAGTTA TCGGGCGAAG GCTGGCGCTG GAACGATCTG
GCCCGTTGGG GTGACCTCGG TCCGCAATTA GCCCCGCGTG ACCCAGCTTT CTCTACCTTT
GTGAAAGGCA AGAGTGAGTT GCTGCCCATT CCGCAGCTTG ACCGGGATCT GAACCCGAAT
CTGGTGCAAA ACCCGAATTA CTGA
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| Protein sequence | MKNRFISLTI AAALAFTGCQ RSLDIVNPNQ VTAESFWKTP TDALAGVNAI YSTTHRGGIS
RWMPFYYIIR SDEGRSQSPD VGIVNNMDQF LITDYNYGNA YSIWNDNYIG INRANQVIDN
VPNIQMDATL KGRYIGEAKF LRAMYYFHLV TLWGNVPLIL QTSVVGDKPN SATTAQVWAQ
IEKDLTDAAA VLPTTYGNAD LGRATKGAAY ALLARAQMQQ QKYTEALTPL QWLVEGDGKS
VYSLMPNYRD NFLITTENNK ESVFEWQFQI NPAEYTDDDT ETPNQNYGTS LAKFFGPPPV
GWSDGEAQRW PTREFTERTT TGARDPRLEA SFLFDSTDVR GPDFTQIYGQ TFTQRYGRDN
KRVWFRKFQN DHWKTEEDYR SPNNWRYIRY ADVLLMYAEA LNATGKTTQA YTYVDQVRQR
AGLPTLTVAK PGLTQAQFLA QLKHERLLEL SGEGWRWNDL ARWGDLGPQL APRDPAFSTF
VKGKSELLPI PQLDRDLNPN LVQNPNY
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