| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3381 |
|---|
| Symbol | |
|---|
| ID | 8727134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 4085582 |
|---|
| End bp | 4086949 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_003388188 |
|---|
| Protein GI | 284038258 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.936479 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.571146 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACACC TGCTTCTATT CATCATCCTG CTTCTCGCTT CGTGTGCTGC GCTTTCGGCC
CAGGCCCTAA TCAGCAATGG CCAGCGCGAC ATTGTATTCA AATCCGTCAA TGTGATCCCC
ATGGACCGCG AGCGCGTGCT CGAAAATCAG ACGGTTGTGG TGCGGAACGG CCGGATAGCC
GCCCTGGGTA CGGCTGGAAA AGTAGCTGTC AGCAAAGATG CGCTGGTGAT TGACGCCAAA
GGGAAATACC TGACGCCGGG CTGGGCTGAA ATTCACGCCC ACGTGCCGCC CATCGACGAT
ATCGAGCCCA TGAAAGAGGT ACTGATGCTG TATCTGGCCA ACGGCATTAC GACCATTCGG
GGTATGCTGG GCCACCCCCG CCATCTGGAA CTTCGCAGTA AGATCAACAG CGGTGAAATT
CTGGGGCCAC ATTTTTACGC CACCGGCCCA TCATTCAACG GGCAAACCGT GAAGACCGCC
GAGCGGGGTG CCCAGATGGT TCGCGAGCAG AAAGCGGCTG GTTATGATTT TCTCAAACTG
CATCCGGGAC TCACCAAAGA GACGTTCCCG GCCATTGCCA AAACGGCGCA CGAAGTCGGT
ATTCCTTTTG TAGGCCACGT GTCGTTCAAT GTGGGTGTCT GGCGGGCAAT TGATGCGGAG
TACTCGTCCA TCGACCATAT GGACGGATTT GTGGAGGCCA TCGTTCCCCG TTCGGATACG
CTGGCCGAAC CCGAAACCGG CCTGTTTGCG TCCTGGATCG CCTACCGGGC CGATGCCTCG
CAGATTCCCA AACTTGTAAA GGGTCTGCGC GATAAGCATG TCCGAGTCGT GCCCACGCAG
GCTCTGGCCG AACGCTGGCT CTCGCCCTTA CCCGCCGATG CGTTTACGAA CGACCCCGAA
ATGAAGTATA TGAAACCGGA GCAGGTTACA AGCTGGGAGA ATACCAAAAA AAGCTACCTC
GCCAATCCAA ACTTCTCGAA AGAACATGCC GAAAAACTGA TTCAGATTCG CCGGAAGCTC
ATCTATGAAT GCCAGAAAAA CGGCGTCGAT ATTCTGTTAG GCTCCGATGC GCCCCAGATT
TTCAATGTGC CCGGCTTCTC CATCCACCAC GAAATGAAAT ACATGGTCGA CGCCGGACTG
ACGCCCTACG AAACCCTGCG GACGGGCACG GTCAACGTGG CATCTTACCT GAACAAACCC
GATTGGGGCG TCGTGAAGAC GGGAAATGTA TCGGACCTGG TGTTACTCAG TGGAAACCCG
CTGAAAGACA TCAGCCAGAC CAAAAACATT GAGGGCGTAA TGATGGGTAC GAACTGGCTG
TCGAAGGCGT ATATCCAGAA CGAGTTGAAA AAGCTGGAGA AACAGTGA
|
|---|
| Protein sequence | MKHLLLFIIL LLASCAALSA QALISNGQRD IVFKSVNVIP MDRERVLENQ TVVVRNGRIA
ALGTAGKVAV SKDALVIDAK GKYLTPGWAE IHAHVPPIDD IEPMKEVLML YLANGITTIR
GMLGHPRHLE LRSKINSGEI LGPHFYATGP SFNGQTVKTA ERGAQMVREQ KAAGYDFLKL
HPGLTKETFP AIAKTAHEVG IPFVGHVSFN VGVWRAIDAE YSSIDHMDGF VEAIVPRSDT
LAEPETGLFA SWIAYRADAS QIPKLVKGLR DKHVRVVPTQ ALAERWLSPL PADAFTNDPE
MKYMKPEQVT SWENTKKSYL ANPNFSKEHA EKLIQIRRKL IYECQKNGVD ILLGSDAPQI
FNVPGFSIHH EMKYMVDAGL TPYETLRTGT VNVASYLNKP DWGVVKTGNV SDLVLLSGNP
LKDISQTKNI EGVMMGTNWL SKAYIQNELK KLEKQ
|
|---|
| |