Gene Slin_3350 details

Gene Information

• Locus tag: Slin_3350
• ID: 8727103
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Spirosoma linguale DSM 74
• Kingdom: Bacteria
• Replicon accession: NC_013730
• Strand: +
• Start bp: 4052000
• End bp: 4055383
• Gene Length: 3384 bp
• Protein Length: 1127 aa
• Translation table: 11
• GC content: 52%
• Product: SNF2-related protein
• Protein accession: YP_003388159
• Protein GI: 284038229

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.932326
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 25
• Fosmid unclonability p-value: 0.174859
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAACAAC CTTCTGAAAA CAGCGACAGC ACTTATTTTG AATACGACTA CCGGCTGGAT 
ACCGTTACGG TTCCCACGTT GACGGACAGC CTGCTGGCCA TGCATAGCGG GGGGTTTCTG 
TCATCAGCAG ATCCGTACGC CGACATTGTT CCGACTACTA TCGGCGTTAA TCAGGGAACG 
TTTACGACGG CATCGCGGGT AACGTACTTT CCCATCGTTA CCGTACAGCA AACGACCGAT 
TCGCTACTCG TATCCTGCAC CTGCGATGCT CCAAAAAATA AACTCTGTTC GCACCAAACC 
CAGGTGCTGT CCAGCCTGAT TGGTCGGCGG GAGCTGCGTA TTTTTTTTGA CCCAGCCATT 
CGGCACGAAG CTATCCGGCA GGTAGCCCGT GACTATGGAC TGGAAAACGA AACCCAACTG 
GACGACTTTT TCCGGCTTGA GTACGACAAT AAATCCATCA GCATTCGACC CAAACGGGAA 
GAACTCATTC CGTTTACTAC GGCCGACCGC GAGCGCTTAA CCGCCAGTTT GCTCCCGAAA 
ACCACCCGGC AGGAACCGTT TTTGGAAGAG CCGTCGCCCC TCCAAAAACG CATACTGGTC 
TTTACGAAGC ATCGGCATTA CGACAACTTC TGTCTAGAGC TTTTTGACGT GGCGACGACC 
AAAGACGGCA AGCCCAAGAA CCCTTTAACA GCCCTCCAGC CACTTGACCT GCTCACGAAA 
GTCAACGACC TGAACGAAGT CAGGTTCTAT TCGGCCGTGG CCAGATTCCA GAACCATCAC 
CGGACCAAAA AGGAGGAAAT TGATCTGGAC GGGCTGCGAT TGGTGACAGG TAATCCATCG 
AAGATGGCGG TTTACTACCA CTCAAGCCGA ATTTCGGAGA ACATAACGGC TCACTCGCTG 
GTCCCGATCA AACTGGCCAG CCTGCAAACC GACCTTCGGT TGACCGTTCA GTATAGCGAC 
AGCTTTTACG AGGTTGGCGG CACCGTTACC ATCAACGGGG CAACGCATGG TTTACACACC 
CTGACACTTC GGTACGATTA CTTTATTCTG CTCGATGATA CGCTGTATCT GATCGACAAC 
CCGGCTTACC TGCGCGTTAT TCAGTTTTTC AGTAAAAAGA AGACCCGGCT AGCCATCCAC 
CAGTCGAAGT ACGACTTCTT TCAGCAAACG GTTTTGTCGG AACTGGAAGA TCAGGTTTTA 
ATTCAATACG CGTACCTGAA ACCGGCTACG CCCCGGCAGC TGGCTCAGCA GGGTTTTGCC 
GAGGAGCGAG AGCGGCTTAT TTACCTGTCG GGGACGGAGA ATTATGTGTT CCTGACGCCG 
GTTATGAAAT ACGGCAACGT CGAAGTTCCG GTGCTCTCCA AACGGCAGAT TCACGGCGTC 
GACCGTAAGG GGAAGCCGTT TTCGGTAGCG CGGGACGAAG CCGCCGAGAT AGCGTTTACC 
ATGACGGTGC TGGCGCAGCA TCCCGATTTT TATGATCAGC TCAACCAGAG TTATTTCTAT 
CTGCACAAAA AGCACGTGCT GGATGAGGGC TGGTTTCTGG ACGCCTTCGA GGCATGGGCC 
AGCCAAGGCA TTAAGGTGTT GGGCTTTAAT ACGCTGAAGA ATAATAAGCT GAACCCCAAC 
AAGGCCAAAG TCTCGGTGAC GGTGAGCAGC GGCCTCAACT GGTTCGAAAC GGAACTGGGA 
CTGTCGTACG GTAAGCAAAC AGTATCACTC AAACACCTGC ACAAAGCCAT CAAAAATCGC 
AGCCGGTTCG TTACACTGGA CGATGGAACG CAGGGCGTAC TCCCCACCGA ATGGCTCGAC 
CGCTTTTCGG CCTACTTCCA GGCGGGTGAA ATTGTCGAAG ACCGCATCCG AACGCCCAAA 
GTCAATTTTC AGAGCATCCG CGAACTATAC GCCGAGGAAG AACTACTGAA TGACGTGAAA 
GATCAGTTAG CGCTCTTCGC CAAAGGGTTC CGTGATTTTA CGTCCATCCG CCCCGTTGTC 
GTTCCGAACG AACTACAGGC CATCCTTCGG GATTACCAGA AAGAAGGGCT AAACTGGTTG 
AATTTCCTCG ACGAGCTTGG TTTTGGCGGT TGCCTGGCCG ACGATATGGG TCTTGGAAAA 
ACCCTTCAGA TCATCGCGTT TATTCTCTTG CAGCGCACAA AGAACCGGTC GAATACCAAT 
CTGGTCGTTG TTCCCAAATC GCTGCTCTTC AACTGGCAGG CCGAAGTAGC GAAATTTGCT 
CCCAGCCTCC GCATACATAC TTTCTACGGT GCTAACCGCA GCCTGACGAA ACAGGTGTTC 
GATCAATACG AAATCATCCT GACCTCGTAC GGTACGCTTC TGTCCGACAT TCGTTCTTTG 
AAGGAATACC CGTTCAACTA TGTGTTTCTG GATGAGTCGC AGGCCATTAA AAACCCTGAA 
TCGCAGCGGT ACCAGGCCGC CCGTTTGCTA CAGTCCCGCA ACAAGATTGT GCTGACGGGG 
ACGCCCATCG AGAACCACAC TTTCGATCTG TATGGGCAAT TATCATTCGC CTGCCCCGGC 
CTGCTGGGCA GTTACAACCA TTTCAGGGCG CATTACTCCA CACCCATCGA CAAATTTGGC 
GACTACCAGC GTGCCCGCGA GCTACAGAAA AAAATTAACC CGTTCATCCT CCGCCGGACC 
AAAGCTCAGG TCGCGACAGA GCTGCCCGAA AAAACGGAAA TGGTGCTTCA CTGCGACATG 
GGGCTGGAAC AGCGCCGGGT GTATGACGCC TACGAACAGG AGTTCCGGAA TTACCTGCTG 
TCGACCAAAG AAGGCGACAT TCCCCGCGCC AAGCTGCATA TATTACAAGG GTTAACGAAG 
CTGCGCCAGA TTTGTAACGC CCCGGTGCTG CTGAACGACG AAGAGTTTTA CGGCAACTCG 
TCGGCAAAGA TCGACGTGCT GATGGAGCAG ATCGAGAACA AGTCGCCCAA CCATAAAATC 
CTGGTCTTTT CCCAGTTCGT GACCATGCTC GACCTGATCA AGAAAGAGCT GGAAGCCCGG 
CAGATCGGGT TTGAGTACCT CACCGGCCAA ACCAACGACC GGCAGGCTAT CGTTAACCGA 
TTTCAGACCG ACGCTAGCGT TCGGGTGTTT CTGATCAGTC TCAAAGCGGG TGGCACCGGC 
CTTAACCTGA CTCAGGCCGA TTATGTATAT CTGGTTGATC CGTGGTGGAA CCCGGCGGTC 
GAAAATCAGG CCATCGACCG GAGTTACCGG ATTGGGCAGA AGAAGAATGT AGTGGCCGTG 
CGGCTAATCT GTCCCAACAC CATTGAAGAA AAGATTTTGC TGCTTCAGGA AACCAAGCAG 
GAGTTGGCCG ATAAGCTGGT TAGAACAGAT ACCGCTATAC TCAAATCTTT GTCGAGAAAA 
GATCTGTTGG AATTACTCAG TTAG 

 

Protein sequence

MQQPSENSDS TYFEYDYRLD TVTVPTLTDS LLAMHSGGFL SSADPYADIV PTTIGVNQGT 
FTTASRVTYF PIVTVQQTTD SLLVSCTCDA PKNKLCSHQT QVLSSLIGRR ELRIFFDPAI 
RHEAIRQVAR DYGLENETQL DDFFRLEYDN KSISIRPKRE ELIPFTTADR ERLTASLLPK 
TTRQEPFLEE PSPLQKRILV FTKHRHYDNF CLELFDVATT KDGKPKNPLT ALQPLDLLTK 
VNDLNEVRFY SAVARFQNHH RTKKEEIDLD GLRLVTGNPS KMAVYYHSSR ISENITAHSL 
VPIKLASLQT DLRLTVQYSD SFYEVGGTVT INGATHGLHT LTLRYDYFIL LDDTLYLIDN 
PAYLRVIQFF SKKKTRLAIH QSKYDFFQQT VLSELEDQVL IQYAYLKPAT PRQLAQQGFA 
EERERLIYLS GTENYVFLTP VMKYGNVEVP VLSKRQIHGV DRKGKPFSVA RDEAAEIAFT 
MTVLAQHPDF YDQLNQSYFY LHKKHVLDEG WFLDAFEAWA SQGIKVLGFN TLKNNKLNPN 
KAKVSVTVSS GLNWFETELG LSYGKQTVSL KHLHKAIKNR SRFVTLDDGT QGVLPTEWLD 
RFSAYFQAGE IVEDRIRTPK VNFQSIRELY AEEELLNDVK DQLALFAKGF RDFTSIRPVV 
VPNELQAILR DYQKEGLNWL NFLDELGFGG CLADDMGLGK TLQIIAFILL QRTKNRSNTN 
LVVVPKSLLF NWQAEVAKFA PSLRIHTFYG ANRSLTKQVF DQYEIILTSY GTLLSDIRSL 
KEYPFNYVFL DESQAIKNPE SQRYQAARLL QSRNKIVLTG TPIENHTFDL YGQLSFACPG 
LLGSYNHFRA HYSTPIDKFG DYQRARELQK KINPFILRRT KAQVATELPE KTEMVLHCDM 
GLEQRRVYDA YEQEFRNYLL STKEGDIPRA KLHILQGLTK LRQICNAPVL LNDEEFYGNS 
SAKIDVLMEQ IENKSPNHKI LVFSQFVTML DLIKKELEAR QIGFEYLTGQ TNDRQAIVNR 
FQTDASVRVF LISLKAGGTG LNLTQADYVY LVDPWWNPAV ENQAIDRSYR IGQKKNVVAV 
RLICPNTIEE KILLLQETKQ ELADKLVRTD TAILKSLSRK DLLELLS