Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3340 |
Symbol | |
ID | 8727093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4039282 |
End bp | 4040073 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003388149 |
Protein GI | 284038219 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.205773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.325708 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAGG ATATTGACAA GTTACTGGAA CGCTATTATG AGGGAGAAAC ATCGCTGGAT GAAGAAAGGC AGCTACGGCA GTTCTTCCAG CAGGAATCCA TTCCGGTGCA CCTGCAACAC CATTCAGCCC AGTTTCGCTA TTTTGCTGAT GCTCATAACG AACATCCCTC GCTAAAGTTC AGCACCGCAT TAGCCAGCAA ACTGGATCCG TTGACAAGCA ATCCGTTCGG CATTTTGAAA AACTGGAGTG TACGGATAGC GGCCAGTATT GCGTTGCTAC TTATTGGCTT TGCCGGAGGA CTGCTTTATA CCCATTGGCG ATCTGCCGAT GCCAGCACCC AGTTGGCCAA TTCGACAGCC AGTGCCACCC CTGAAGTAGC GATCAAAAAA GTGCTGGCGT TCGAGTCGAA TCCAAAAACA TCAGCCAGTG AGCGTATTCA GGCAATCAAC CAGAGTTTTG AGCTTACCCA GGCTGATCGG GATATAACCC AGCTTCTGAT CAATACCCTG AATTTTGATC CGAACGTAAA CGTCCGGTTG GCGGCCTGTC AGGCGCTGGT CCGCTTTGAA AACGAACCTG TGGTACGTAA TGCGCTAATC CAGTCTCTTC AGATTCAAAC GGACCCGAAT GTTCAGATAA CACTCATTGA CGTACTCGTT GCCATTAAAG AAAAGCGGGC CGTTACTGAA ATACAACGTC TTGCCCAGAA TCAGCAGGTA CTTGAAGCCG TACGTATCAA AGCAGCCGAA GGCATTACCC GGTTGGATAA TACCTCACAT TCACCTTCAT AA
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Protein sequence | MKQDIDKLLE RYYEGETSLD EERQLRQFFQ QESIPVHLQH HSAQFRYFAD AHNEHPSLKF STALASKLDP LTSNPFGILK NWSVRIAASI ALLLIGFAGG LLYTHWRSAD ASTQLANSTA SATPEVAIKK VLAFESNPKT SASERIQAIN QSFELTQADR DITQLLINTL NFDPNVNVRL AACQALVRFE NEPVVRNALI QSLQIQTDPN VQITLIDVLV AIKEKRAVTE IQRLAQNQQV LEAVRIKAAE GITRLDNTSH SPS
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