Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3338 |
Symbol | |
ID | 8727091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4037369 |
End bp | 4038517 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | glycoside hydrolase family 5 |
Protein accession | YP_003388147 |
Protein GI | 284038217 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0734572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.542716 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGAA GGACGTTTAT CCAGAACACG GGTTTGCTTA CGGCAGCCCT CAGCACCACC GGAACCGAAC TTTTGGCCAG TTCGACCCTC GGCACCGCAG CCAAAAACAA ACTGCCCAAA TGGAAAGGAT TTAACCTGCT GGACTTCTTC TCGCCCGACC CGTCCAAGAG TCGGAAAGGC ACGACCGAAG ATCACCTCAA ATGGATGCAG GACTGGGGTT TCGATTTCGT CCGGCTGCCG ATGGCGTATC CGTATTACCT GAAGTTCGAC CGGAGCCGCA ACATCACCCC CGACGAAGTC TACCAGATCG ACCCGCAGGC CGTCGACCGG ATTGATGAGC TGGTCGCCAT GGCGCACAAG CATAATCTGC ACGTGAGCCT GAATCTGCAC CGCGCGCCGG GCTACTGCGT CAATGCGGGC TTTCACGAAC CGTATAATCT CTGGACCGAT CAGGCGGCAC TGGATGCATT CTGCTTTCAC TGGAACATGT GGGCGAAACG GTATAAGAAT ATATCCGCCA AAAAAATCAG CTTCGACCTG CTGAACGAAC CCGGCATGCG GGCCGACATG AACGACCAGC ACTCCAAACG GGGTTCGGTT CCCGGCGACG TGTACCGAAA AGTGGCGCTG GCTGCTTCGG ACGCTATCTG GAAAGAGAAC AAGAACCACC TCATTATTGC CGATGGCAAC GACACCGGCT CGTCGGTGAT TCCATCCATC GCCGATCTAA ACATTGCCCA GAGCTGCCGG GGCTATAATC CGGGCATTAT TTCGCACTAC AAAGCGCCAT GGGCCAACAA AGACCCGGAA AGTCTGCCCG AGCCCAAATG GCCGGGGCAG GTGGGCGACA AGTACCTGAG CCGGACCATG CTGGAAACAT TCTACCAGCC GTGGATCGAG TTGGTCAACA AAGGCGTTGG CGTGCATTGT GGCGAGTGCG GTTGCTGGAA CAAAACCCCG CACGATGTGT TCCTGGCCTG GTTCGGCGAC GTACTCGACA TCCTGTCAAA AAACGGCATC GGCTTCGCGC TTTGGGAGTT CATCGGCGAC TTCGGCATCC TGAACTCGGG CCGGGCCGAT GTGGCTTACG AAGACTGGCA CGGTTATAAA CTCGACCGAA AACTGCTGGA GCTGATCAGA AAGGCATAA
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Protein sequence | MQRRTFIQNT GLLTAALSTT GTELLASSTL GTAAKNKLPK WKGFNLLDFF SPDPSKSRKG TTEDHLKWMQ DWGFDFVRLP MAYPYYLKFD RSRNITPDEV YQIDPQAVDR IDELVAMAHK HNLHVSLNLH RAPGYCVNAG FHEPYNLWTD QAALDAFCFH WNMWAKRYKN ISAKKISFDL LNEPGMRADM NDQHSKRGSV PGDVYRKVAL AASDAIWKEN KNHLIIADGN DTGSSVIPSI ADLNIAQSCR GYNPGIISHY KAPWANKDPE SLPEPKWPGQ VGDKYLSRTM LETFYQPWIE LVNKGVGVHC GECGCWNKTP HDVFLAWFGD VLDILSKNGI GFALWEFIGD FGILNSGRAD VAYEDWHGYK LDRKLLELIR KA
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