Gene Slin_3336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3336 
Symbol 
ID8727089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4035226 
End bp4036308 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388145 
Protein GI284038215 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.571318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.70382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCAT CATTTCTCCT GAGCGGCCTC TGGACATTGA TGCAGCCAAC GGTAGGTGAC 
TCTGTACGGC AGCAAATTGG TATACAGGCG TATACCGGGT TCATCATTCC GCACGCGCCC
GATCTCAAAG CCATTGCGCA AAGCCGACCC GTTGGTATCG AATTAACTTA TAGCCGAACC
GCCTTCAATC GGGCGGCTTA TGAACGCTGC AACTGCTTTG CGCGTACGGG TGGGTATATA
AATTATACAG CGTTCAATAA CCCCGCCGAA TTGGGCCGAA CAGTGGGAAT GGGCGGGTAT
TTCGAGCCGC TGATCCGGCA TCGGAAATCA CTTTATTTTT CCCTCAGGGC AACGGCTGGC
CTGGCCTATA TCACGCGGGT GTATAATGCC GAATCGAACC CAGGAAATAC CTTTTTTAGC
TCACCACTGA GTGGGATGCT GGCCCTTTCG GCCAGCGCAC ATCACCGTCT GACGCGGCAT
GTTCATGCAT TGGTAACGGC TGGTTATAAC CATATTTCCA ACGGAGGCAT CCGCCAACCC
AATCGGGGCA TGAATTTTCC TACGCTGGGG TTGGGGGTAG TGTACATAAC CAATCCAATG
CCTTTGCCCA AGGCAGCTGA CTGGGCGAAA CCAACGATTG ACAGCCGATT TACAAAACGG
GTGATGGGAT TTAGCTCGGT GCGGACGTTG CCCCAAACGG ATGATCTGCC CGAAACGGCT
GGGTGGCTTT GGGGCTTGTC AACCACAGCC GGGTACCGCG TCAGCCGGTT TCATGCTTTC
ACGGGTGGGG TGGAGTTTGT GGACGACGGC TATATTCGGG AACAGCTCCG CCGGGAAAAT
CAGCTGACCA ATCACCGTCA GCTGGGTTTG CTGGGTGGTT ACGAGTTGTG GCTTGGCCGG
TACACGTTCA CGACGCATCT GGGCTGGAAC CTCGTTCAAC CGGCGTCCCT GCCCGACGGT
CGCCTTTTTC AACGATACCA ACTCCTATAT ACGTTACGTG ACCGCTATCT GGTGGGCGTC
GGCCTTAGAG CCAGATTGAA CGTAGCCGAG GGATTCGATC TGCGAATGGG GGTACGATTC
TAA
 
Protein sequence
MNPSFLLSGL WTLMQPTVGD SVRQQIGIQA YTGFIIPHAP DLKAIAQSRP VGIELTYSRT 
AFNRAAYERC NCFARTGGYI NYTAFNNPAE LGRTVGMGGY FEPLIRHRKS LYFSLRATAG
LAYITRVYNA ESNPGNTFFS SPLSGMLALS ASAHHRLTRH VHALVTAGYN HISNGGIRQP
NRGMNFPTLG LGVVYITNPM PLPKAADWAK PTIDSRFTKR VMGFSSVRTL PQTDDLPETA
GWLWGLSTTA GYRVSRFHAF TGGVEFVDDG YIREQLRREN QLTNHRQLGL LGGYELWLGR
YTFTTHLGWN LVQPASLPDG RLFQRYQLLY TLRDRYLVGV GLRARLNVAE GFDLRMGVRF