Gene Slin_3334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3334 
Symbol 
ID8727087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4032276 
End bp4033325 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content55% 
IMG OID 
ProductBeta-lactamase 
Protein accessionYP_003388143 
Protein GI284038213 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTAA CTCCCGCTAA ATTCACTTCT CTTCTCGTTG GCCTTCTTCT GGTACTGAAT 
CTATCAGGTC TGGCCCAAAC GAACACCGCT GGTAAAAAAG ACCTGGCTAC ACAGCGGCTG
GAGCAGGAAC TGAATCGTAT TGCGGCAATC GCCAAAGCCA AAGTAGGCAT CTGTGCTCTG
CACCTCGAAT CGGGGAAGCA GGTGAGTTTA AACCTTCAGG AGCGATTTCC GATGGCGAGT
ACCGTGAAGG TTGCTATTGC GGTGCAACTG TTCACGCTGA TCGAACAGGG TAAACTGTCG
CTAATGACGA TGGTCGATCT GCAACCGTCT GATCTGCATC CGGGTAGCGG TACACTCGAA
GTACTATTTG CCAAACCCGG CGTTCAGCTG TCCGTGCAGA ATTTGCTGGA ATTGATGATG
GTCATCAGCG ACAACTCCGC CACCGATATT CTGCTCCGGC TGGTGGGCGG TACCGAAGCC
GTTCAAAATC GTTTGAAAAC GCTGGGCATT CAGGGGATGT CGGTCGACCG CACAATTATC
CAGTTGATCG CCGATCTCGA AGGCATTACG CTACCCCCTT CCGACAAATG GACGGTTGGC
TTTTATGCTA AACTGGATAG CACCACGACG CCGGAAACAA GACGAGCCGC AGCAGCCCGA
CTCAAAACGG ACCCACGCGA TACCTCAACA CCCGACGCTA TGGTGAACCT GTTGGCCCAA
ATTTACCGGG GCACAGCCCT CAAACCCGAA AGCCGGGCGC TGCTGCTGGG TGTCATGGAA
CGCTGCCGGG GTGGAGCCGC CCGCCTGAAA GGTTACTTAC CCCCAAACAC GATCATTGCT
CATAAAACAG GTTCGCTGGA TGGCAGCGCC ACCGACGACG TAGGCATCAT TACACTGCCG
GGCGATGCGG GCCATATCGC CATTGCCGTT TTTGTGGGTG ATTCGCCCAT GCCGCTCGCC
GAACGGGAAC AGACCATCGC CCACGCGGCC CGATCCATTT ATGATTTCTT CCTGTATCAG
CCAGTTAGTT CATCGAACAC AGGTCGATAG
 
Protein sequence
MTLTPAKFTS LLVGLLLVLN LSGLAQTNTA GKKDLATQRL EQELNRIAAI AKAKVGICAL 
HLESGKQVSL NLQERFPMAS TVKVAIAVQL FTLIEQGKLS LMTMVDLQPS DLHPGSGTLE
VLFAKPGVQL SVQNLLELMM VISDNSATDI LLRLVGGTEA VQNRLKTLGI QGMSVDRTII
QLIADLEGIT LPPSDKWTVG FYAKLDSTTT PETRRAAAAR LKTDPRDTST PDAMVNLLAQ
IYRGTALKPE SRALLLGVME RCRGGAARLK GYLPPNTIIA HKTGSLDGSA TDDVGIITLP
GDAGHIAIAV FVGDSPMPLA EREQTIAHAA RSIYDFFLYQ PVSSSNTGR