| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3329 |
|---|
| Symbol | |
|---|
| ID | 8727082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 4025998 |
|---|
| End bp | 4027140 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_003388138 |
|---|
| Protein GI | 284038208 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTTT CAGAACTCGG TTTATCAAAG CCCCTTATTA AAGCCATAGC CTCCCAGCAT
TACCCGAAGC CGTATCCCAT TCAGCAGGAG GCCATTCCGG CTATTTTGCA GGGGAAGGAT
ATTCTGGGTA TTGCCAAAAC GGGTTCGGGG AAAACCGCCA GTTTTGTCCT CCCTATTCTG
GAACTGTTTC AACGGAAAAG CGTAGCCCGA AACCGATATA TTAAAGCGCT GGCACTCGTC
CCAACGCGTG AACTGGCCGT TCAGGTGGCC GAAGTTTTTC AAACGTTCAG TGCAAACTTG
CCTCGTAAAG TGAAAACAGT GGCGGTATTT GGGGGCGTAT CCATTAATCC GCAGATGATG
GCCCTCCGGG ATGCCGAAAT CGTGGTGGCT ACGCCCGGCC GGTTACTGGA CCTGATGGCG
TCTAACGCGC TTCAACTCAC AGACGTTGAT ATCCTCGTGC TGGACGAAGC CGATAAAATG
CTCGATCTTG GCTTTGAAGA GGAAATGGAA CGGATCTTCG ACCGACTGCC GCGCCACCGG
CAAACGATTC TCTTCTCCGC CACACTGGGC GACGCTATTG AGGACATTAA CAAAAACCTA
CTGCGAAATC CCGTAAAAAT TGAAGTAGTT GAGGAGGAGC AGAATCTCGA TTTGATTAAA
CAAACAGCCT ATCGTGTCGA CGCTGAGCGC AAAGGGCCGC TGCTACGTTA CCTCATCAAA
GAAGGAAAAA TGAAGCAGGT ATTAGTCTTC GTCTCGTCTA CCCGAACGGC CGATAATGTG
GTGGTTAAAC TCAATAAGAA CGGTATTCAT GCAGCTGCCA TTCACAGCGG CAAAACGCAG
GGTGCCCGTA CCGATGCGCT CACCAAGTTC AAAGGGGGGC ACTTAACCGT TCTTGTTGCT
ACCGATTTGA TTTCCAGAGG CATTGATATT CAGTTGTTGC CGCACGTAAT CAACTTCGAA
TTGCCCCGTT CGCCCAAAGA TTACATTCAC CGAATCGGCC GAACGGGCCG TGCCGAAGCC
GAAGGGGAAG CCATTTCGCT GATTTGCCCG GAGGATGAAC ATCACTTCAA GATCATTCAG
AAGAAGATGG GCAAACGGGT TGAGATACTG GAAACGACGG ACCTGAATCT TATGGGCTAT
TAA
|
|---|
| Protein sequence | MPFSELGLSK PLIKAIASQH YPKPYPIQQE AIPAILQGKD ILGIAKTGSG KTASFVLPIL
ELFQRKSVAR NRYIKALALV PTRELAVQVA EVFQTFSANL PRKVKTVAVF GGVSINPQMM
ALRDAEIVVA TPGRLLDLMA SNALQLTDVD ILVLDEADKM LDLGFEEEME RIFDRLPRHR
QTILFSATLG DAIEDINKNL LRNPVKIEVV EEEQNLDLIK QTAYRVDAER KGPLLRYLIK
EGKMKQVLVF VSSTRTADNV VVKLNKNGIH AAAIHSGKTQ GARTDALTKF KGGHLTVLVA
TDLISRGIDI QLLPHVINFE LPRSPKDYIH RIGRTGRAEA EGEAISLICP EDEHHFKIIQ
KKMGKRVEIL ETTDLNLMGY
|
|---|
| |