Gene Slin_3318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3318 
Symbol 
ID8727071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4016482 
End bp4017552 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content54% 
IMG OID 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_003388128 
Protein GI284038198 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.470723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTTC TTTTTTCACC GCTTACCATC CGCAGTATCC AGCTCAAAAA TCGCATCGTA 
GTGTCGCCCA TGTGTCAATA TTCCAGTGAA GACGGTTTTG CAACGGACTG GCATCTTGTA
CACTTGGGTA GCCGGGCCGT TGGCGGAGCC GCGCTGATTA TTACTGAAGC CGCTGCCATA
TCGCCGGAAG GGCGCATATC GCCTAATGAT CTTGGCATCT GGAAAGATGA ACATAAGGAC
GGCTTAAAGC GAATTACTCA GTTTATTCAG CAACAGGGAT CTGTGGCAGG TATTCAACTG
GCTCATGCCG GACGGAAGGC CAGTACGCAG CGGCCCTGGG ACGGAGGGAA AGCCATTGCA
CCTACCGAGA CAACCGGCTG GCAAACGGTG GCTCCCAGCG CCATTCCCTT CAGTGAAGGC
AGTCCCGAAC CGCTGGCATT AACCGATGAA GGTATCGAAA AGGTACGTGC CGACTTTACA
CTGGCTGCTC AGCGCTCGCT GGACGCAGGC TTTCAGGTTG TCGAAATTCA CGCAGCTCAC
GGGTATTTGC TCCACCAGTT CTTGTCGCCG TTGAGTAATC ACCGCACCGA TGCCTACGGT
GGTTCGTTCG AGAATCGCAT TCGGTTGTTA CTCGAAGTGA TTGAACGCGT CCAAGCAGTG
TGGCCGTCGA CGTTGCCGCT GTTTGTGCGT ATATCGGCTA CGGACTGGAC GGAAGGTGGC
TGGACAATTG ACGATTCGGT GCGGTTAGCG GGTGTCCTCA AAGACAAAGG CGTAGATGTT
ATCGACTGTT CAACGGGTGG CAATGTAGCC CATGCCCGAA TTCCGCTGAG TCCCGGTTAT
CAGGTTGCGT TTTCCGAGCA GATTAAGCAA CAGGCAGGCA TACAAACGGC CGCCGTAGGG
TTGATTACGA ATGCTGCACA GGCTGAGGCT ATCCTAACAA ATGGGCAGGC TGACTTGATT
TTGCTGGCGC GTGAGTTTTT GCGCGATCCG CATTTTTCAC TTCATGCGGC TCATGAGTTA
GGCGAAGATA TACCGTGGCC GGTACAGTAC GAGCGTGCCA AACCCCGCTG A
 
Protein sequence
MSVLFSPLTI RSIQLKNRIV VSPMCQYSSE DGFATDWHLV HLGSRAVGGA ALIITEAAAI 
SPEGRISPND LGIWKDEHKD GLKRITQFIQ QQGSVAGIQL AHAGRKASTQ RPWDGGKAIA
PTETTGWQTV APSAIPFSEG SPEPLALTDE GIEKVRADFT LAAQRSLDAG FQVVEIHAAH
GYLLHQFLSP LSNHRTDAYG GSFENRIRLL LEVIERVQAV WPSTLPLFVR ISATDWTEGG
WTIDDSVRLA GVLKDKGVDV IDCSTGGNVA HARIPLSPGY QVAFSEQIKQ QAGIQTAAVG
LITNAAQAEA ILTNGQADLI LLAREFLRDP HFSLHAAHEL GEDIPWPVQY ERAKPR