| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3297 |
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| Symbol | |
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| ID | 8727050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 3987188 |
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| End bp | 3988369 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | |
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| Product | small-conductance mechanosensitive channel |
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| Protein accession | YP_003388107 |
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| Protein GI | 284038177 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000803764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA AGACATTGCT GATCATCTCA TTCCTGTTTT TCTTTATTCT ACCCTTTCTG
GGAAGTTACC TGAAATGGGG TGGGCTGCCG CCTGGGTATG GGTTGTTCCC GGCGCAAAAA
GTAGCTGACG ATCCACCGTT CAACCAGACG TATTTTAATG TCTGTTCACT GGTCGCTATT
TTTATACTAA CCTTTTTACT GCTGCCGCAA CTCTTTGGCT TCAAGAAAAA GCCGGATGCA
GTGGAGAGTG AGAAAACGGC TGTCGGGTAT CCGGTTTGGT TTAAACCGGC GCTCATTGTT
GTTCTGATCA GCTGGCTGCT CATGTGGGGC CGATTTAAGG TGCTGAAACC CGCCGACAAC
TTTACATTTG TGCCGCTTTG GTGGGGGTTT ATCTTTGTTT TGGACGGCAT CGTCTACAAA
CGGAACAATG GCGTGTCATT GATGTCGGCC AAACCCAATA CCGTGAAAAT TCTGGCGGTT
ACGTCGGCCT TTAGCTGGTT CGTTTTTGAA TATCAGAACT TTTTTGTGCT CGAAAACTGG
TATTACCCCA ACAACAACAT ACTCAGTAAT TTCGGCAATA TCTCGTGGCA GCTAGTCTCC
TACACAACCG TACTACCCGC TATTTTTGAA TGGTACTGGC TGTTGCGTAC GGTCAAATCC
ATGAAGAACC GGTACTCATT TGGCCCGGCG ATCCGATTCT CAACCACAGG TCAATACATA
TGCCTGGGTA TAGGTGGTAT TTCCCTTTTT CTGATGGGGT ATTTCCCGAA CGAATTATTC
TGGATGTTAT GGGTAAGTAT GTTGCCAATG CTGGTTCCTG CTATGGCAAT TTCCGGTTTT
TGGACTCCCT TCACTGAAAT CAGTAAGAAA GGTGACTGGT CCTTTGTTGT TTTAATTGCA
ATCAGCACGC TATTGAATGG CTTCTTCTGG GAGTTCTGGA ATTTTGGAAG CGAGTGGTTT
CATGATGATA TGCCTACCAA CCCAAACTAC TGGAAGTACT CTGTTCCTTA TCTGGATAAG
TACCATCTGT TTTCTGAAAT GCCGATTCTG GGGTACTTCG GTTATCTGTT GTTTGGTAAT
GCCTGCTGGT TATTATGGGT TATCGTTGCC CGTTTGGTTG GTTTTGATGC ATCAGTCGAT
GCGGGCCAGG TGAGCGAAGA GAAAGTATTA CAGATAAATT AA
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| Protein sequence | MKKKTLLIIS FLFFFILPFL GSYLKWGGLP PGYGLFPAQK VADDPPFNQT YFNVCSLVAI
FILTFLLLPQ LFGFKKKPDA VESEKTAVGY PVWFKPALIV VLISWLLMWG RFKVLKPADN
FTFVPLWWGF IFVLDGIVYK RNNGVSLMSA KPNTVKILAV TSAFSWFVFE YQNFFVLENW
YYPNNNILSN FGNISWQLVS YTTVLPAIFE WYWLLRTVKS MKNRYSFGPA IRFSTTGQYI
CLGIGGISLF LMGYFPNELF WMLWVSMLPM LVPAMAISGF WTPFTEISKK GDWSFVVLIA
ISTLLNGFFW EFWNFGSEWF HDDMPTNPNY WKYSVPYLDK YHLFSEMPIL GYFGYLLFGN
ACWLLWVIVA RLVGFDASVD AGQVSEEKVL QIN
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