| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3291 |
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| Symbol | |
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| ID | 8727044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 3975015 |
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| End bp | 3976367 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | |
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| Product | integrase family protein |
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| Protein accession | YP_003388101 |
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| Protein GI | 284038171 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.671392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.608056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATTA CTTATAACAT AGAACTGAAT AGCAAACCTG ATTCAAAAGG AAGGTCATCA
GTGTTCATTC GCTTACATCT AAAGGGACAA AAGCCAGGGC GAGTACTTAC TACTGTAAGA
ATAGAAAATG CTTCAAAGTA TTGGAGTCCT AAGCAAAAGT GGACAAGATG GATAATTGGC
CACCCTAATC GAGAAGCATT AAACCAAGAA ATTCTAAACG AACACGACCG TATTAAGAAG
CAGGTCCAAG CTTGGCAGGA TGCGGAAACG CCAGGGGCTA TTTTAACACC TGGCCAGCTA
GCCGAACGGT TTAGGGCTGG TTCATCGGAC CTGTATTTCG ATTGGGTAGA CCAGGTACTA
GACGACGTAA AAGAACAGGC ATACGCTACC TACATAGGAA AGCGTAGTGC TGTCAATGCG
TTTAAAAGTT GGGCTGGCGA AACCTTACCG CTGGCGTCTG TTACGCCAGT CCTGGTACGA
TCCTTTCAGG ACTATCTAGT AAAAACACCG ATGGCCTATG GCGGTAAGCG CAAAGGATCG
ACCATTAACA AGATGCTGAA CCGGCTACAT ATTATTCACC AGTCGGTATT AGTTAAAACG
GGTGTTAGTC CCAAAAAAGC CAGTTTACTT TCGCCCTGGA CCGACATAGA CGACCTGGCC
GAACTTAGGC CACGAAAAGC CAAACTAACA GAAACCACGA TCCAGAACGT AGCAGCGCTG
ACAGTCGACA CCACCCGCAG ACGGGTAACA CCGGTAGGAG CGTTTCAAAT TTGGATGTTA
GAACATGTCC TGGCGGGTAT GCGTTTTTCT GATGTTCTGT TTCTGCGCTA CCAGAATTTC
ACCACCGACC AGGATGGCCA GCCGATACAC CTGCGCTATG AAATGCTAAA AACCGGAAAC
GTGGTAAGCA TTCCGATATT AGACGAAGGT AGGGCGTTAC TGAAACGCTA CTGGAATGAA
GAAAGCCAGC CTACAGCTTT TATTTTGCCG TACCTGGATA GTAGCAGACC CTACGCCAAA
ATAATAACGC ATGAGCAATA TAAAGCGGCC AGTTTCGATG TTAAACGAAG ACTGTATAAC
GACCTAGCGC ACTGGAACCG CCAGGTAAAT CTATGCCTAC GGGAAGTCAG AACCGTTGCA
GGCTTACCGG AAAAGCTAAC TAACCACAGC GCCAGGCACA GTTTCGCAGA CCTGGCCAGG
CGAATAATGG AACAGGACGT AAGTTTAAGT ATGTACGATA TTCAGAAAAT GTTAGGACAC
AATAGCATAA TAACGACAGA AGTTTACACT AAAGACTTAC AAGAACCGGA TTCGACTAAG
CCTATGTTTG CAATATTTAG TCGAAAGGAC TAA
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| Protein sequence | MPITYNIELN SKPDSKGRSS VFIRLHLKGQ KPGRVLTTVR IENASKYWSP KQKWTRWIIG
HPNREALNQE ILNEHDRIKK QVQAWQDAET PGAILTPGQL AERFRAGSSD LYFDWVDQVL
DDVKEQAYAT YIGKRSAVNA FKSWAGETLP LASVTPVLVR SFQDYLVKTP MAYGGKRKGS
TINKMLNRLH IIHQSVLVKT GVSPKKASLL SPWTDIDDLA ELRPRKAKLT ETTIQNVAAL
TVDTTRRRVT PVGAFQIWML EHVLAGMRFS DVLFLRYQNF TTDQDGQPIH LRYEMLKTGN
VVSIPILDEG RALLKRYWNE ESQPTAFILP YLDSSRPYAK IITHEQYKAA SFDVKRRLYN
DLAHWNRQVN LCLREVRTVA GLPEKLTNHS ARHSFADLAR RIMEQDVSLS MYDIQKMLGH
NSIITTEVYT KDLQEPDSTK PMFAIFSRKD
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