Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3280 |
Symbol | |
ID | 8727033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3962926 |
End bp | 3963483 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | DNA binding domain protein, excisionase family |
Protein accession | YP_003388090 |
Protein GI | 284038160 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.490551 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCTA ATATCCGCGT AAAGCGAATC TGCGAGCAAT GTGGGGACGA ATTTGAAGCC CGTACAACCG TTACAAAAAC GTGTAGCGAC ACTTGTGCTA AACGAGCCTA CAAAGCCCGC CAACGAGCCG CAAAGGTTAC TGTCAGCAAT GAGCAGACAC GGCGAATAAT TACAAAGCCA TTGGATGACA TTCGAGCTAA AGAAAATCTG AACATTGCCG ATGCCAGTAA ACTATTGGGC GTAAGTCGAT GGACAATTTG GCGGGCTATC AGATCAGGTA ACTTACACGC CGTAAAGTTA GGTAGACGTA CTCTTATTCG TCGTTCGGAC ATTGACCGCC TGTTTGAGAC ACCAACTTTT ACCCAAAAGC CAACACCCGC CCCAGTTGCA TTAGTGGACT GTTATACAAT GAAAGAGATT CAGGAAAAGT ACGGCATTTC TGAAAAAGCT CTTTACACAC TCATACAGCG TAACGGTATA CCTAAACAGT ATAAAGGCCC TTACGCTTAT GTGCCAAAGG TTAGGATTGA TGAACTACTA ATAGCCACAC AACTATGA
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Protein sequence | MSSNIRVKRI CEQCGDEFEA RTTVTKTCSD TCAKRAYKAR QRAAKVTVSN EQTRRIITKP LDDIRAKENL NIADASKLLG VSRWTIWRAI RSGNLHAVKL GRRTLIRRSD IDRLFETPTF TQKPTPAPVA LVDCYTMKEI QEKYGISEKA LYTLIQRNGI PKQYKGPYAY VPKVRIDELL IATQL
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