Gene Slin_3280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3280 
Symbol 
ID8727033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3962926 
End bp3963483 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content45% 
IMG OID 
ProductDNA binding domain protein, excisionase family 
Protein accessionYP_003388090 
Protein GI284038160 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.490551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCTA ATATCCGCGT AAAGCGAATC TGCGAGCAAT GTGGGGACGA ATTTGAAGCC 
CGTACAACCG TTACAAAAAC GTGTAGCGAC ACTTGTGCTA AACGAGCCTA CAAAGCCCGC
CAACGAGCCG CAAAGGTTAC TGTCAGCAAT GAGCAGACAC GGCGAATAAT TACAAAGCCA
TTGGATGACA TTCGAGCTAA AGAAAATCTG AACATTGCCG ATGCCAGTAA ACTATTGGGC
GTAAGTCGAT GGACAATTTG GCGGGCTATC AGATCAGGTA ACTTACACGC CGTAAAGTTA
GGTAGACGTA CTCTTATTCG TCGTTCGGAC ATTGACCGCC TGTTTGAGAC ACCAACTTTT
ACCCAAAAGC CAACACCCGC CCCAGTTGCA TTAGTGGACT GTTATACAAT GAAAGAGATT
CAGGAAAAGT ACGGCATTTC TGAAAAAGCT CTTTACACAC TCATACAGCG TAACGGTATA
CCTAAACAGT ATAAAGGCCC TTACGCTTAT GTGCCAAAGG TTAGGATTGA TGAACTACTA
ATAGCCACAC AACTATGA
 
Protein sequence
MSSNIRVKRI CEQCGDEFEA RTTVTKTCSD TCAKRAYKAR QRAAKVTVSN EQTRRIITKP 
LDDIRAKENL NIADASKLLG VSRWTIWRAI RSGNLHAVKL GRRTLIRRSD IDRLFETPTF
TQKPTPAPVA LVDCYTMKEI QEKYGISEKA LYTLIQRNGI PKQYKGPYAY VPKVRIDELL
IATQL