| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3273 |
|---|
| Symbol | |
|---|
| ID | 8727026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 3955281 |
|---|
| End bp | 3956318 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003388083 |
|---|
| Protein GI | 284038153 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAACGT ACCTGATCTG GTCGCTTCTA CTCCTGACCG CCTGGCTAAC ACTGGCTAGC
TGGCGGACGG ACGCGATCCC TGAAAAATTA TCGGACTACG GCTTTTTTAC CGGTAATCCG
GCCGCGCAGA AACCGGCACC GGGGGTAGTG CCCTACTCGC TAAACACGCC CCTGTTTTCG
GATTATGCTG AAAAGTTGCG GTTCGTCAAA CTGCCCGCTG GTGGGTCGGT GGCGTATAAT
GATTCCAGTG TGCTGAACTT CCCGCAGGGT ACTACCCTCA TCAAAACATT CTATTACCCC
CTCGATTTCC GGGAACCGGC CAAAGGGCGA CGCCTGATGG AAACCCGGCT GCTGGTTCAT
CAGGCCAACG GCTGGAAAGC CTTCGAATAC GTCTGGAATG ACGAACAGAC CGACGCCTTT
CTGGAGGTTG CCGGTGATAC CAAAACAGTT AGCTATGTGG ATGCCGGTGG ACAAACCCGC
CAGCACGCCT ACACCATCCC GAACCTGAAC CAATGTAAAG GCTGTCATAA CCGTAACGAA
GTCATGACGC CCATCGGCCC GTCTATCCGG CAGTTGAACG GTGATCTGGC ATATGCCGCT
ACGGGTACTG AAAACCAGCT CACGTACTGG CAGAAATCAG GGATGCTCAC CGGCTTACCT
TCACTGGCCA GTTGTCCCAA AGCACCCGTC TGGAACGACC CGAAAACGGG CTCCCTTAAC
GACCGGGCGC GTATCTGGCT CGATATCAAC TGTGCCCATT GCCACAATCC GAAAGGCCCG
GCCATGACTT CGGGCCTGAA CCTGAGCCTC ACCGAAACCG ACCCCACCGC GCTGGGTATT
CAGAAAACAC CCGTTGCCGC TGGTCGTGGC TCGGGCGGGC ACCCGTATGA TATTGTACCC
GGCAAACCCG AAGAATCCAT CCTGATCTAC CGGCTCACCT CCACCGATCC CGGTGTCATG
ATGCCCGAAC TCGGCCGAAA AACAGCCCAT TCCGAAAGCC TGGCTCTCCT GCGAGACTGG
ATAAAAGCGA TGAAATGA
|
|---|
| Protein sequence | MRTYLIWSLL LLTAWLTLAS WRTDAIPEKL SDYGFFTGNP AAQKPAPGVV PYSLNTPLFS
DYAEKLRFVK LPAGGSVAYN DSSVLNFPQG TTLIKTFYYP LDFREPAKGR RLMETRLLVH
QANGWKAFEY VWNDEQTDAF LEVAGDTKTV SYVDAGGQTR QHAYTIPNLN QCKGCHNRNE
VMTPIGPSIR QLNGDLAYAA TGTENQLTYW QKSGMLTGLP SLASCPKAPV WNDPKTGSLN
DRARIWLDIN CAHCHNPKGP AMTSGLNLSL TETDPTALGI QKTPVAAGRG SGGHPYDIVP
GKPEESILIY RLTSTDPGVM MPELGRKTAH SESLALLRDW IKAMK
|
|---|
| |